RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 ABHD1Q96SE0 405 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 MIXL1Q9H2W2 232 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 CCDC59Q9P031 241 aaKnown RBP11.5□□□□□ -0.57
USP39-217ENST00000491659 KLK9Q9UKQ9 250 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 PRNDQ9UKY0 176 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 S4R3C0 116 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 DNAH9Q9NYC9 4486 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 GABARAPH6UMI1 98 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 CD3DP04234 171 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 TAS2R19P59542 299 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 MRPS10P82664 201 aaKnown RBP11.49□□□□□ -0.57
USP39-217ENST00000491659 SSBP1Q04837 148 aaKnown RBP11.49□□□□□ -0.57
USP39-217ENST00000491659 SGPP2Q8IWX5 399 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 Q8N402 240 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 GDPD1Q8N9F7 314 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 DYNLRB2Q8TF09 96 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
USP39-217ENST00000491659 ZNF486Q96H40 463 aaPredicted RBP11.49□□□□□ -0.57
USP39-217ENST00000491659 ASCL2Q99929 193 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 FKBP11Q9NYL4 201 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 OR51B2Q9Y5P1 312 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 U3KQK5 164 aa11.49□□□□□ -0.57
USP39-217ENST00000491659 MFSD2BA6NFX1 497 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 H3BMQ9 156 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 CTDSP2O14595 271 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 SERPINE2P07093 398 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 MECP2P51608 486 aaKnown RBP11.48□□□□□ -0.57
USP39-217ENST00000491659 PPP5CP53041 499 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 LHFPL1Q86WI0 220 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 TMEM229BQ8NBD8 167 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 OR2K2Q8NGT1 345 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 TMEM56Q96MV1 263 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 RABL2AQ9UBK7 228 aaPredicted RBP11.48□□□□□ -0.57
USP39-217ENST00000491659 RABL2BQ9UNT1 228 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 NSG2Q9Y328 171 aa11.48□□□□□ -0.57
USP39-217ENST00000491659 C15orf61A6NNL5 157 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 LGALS9O00182 355 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 OR2C1O95371 312 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 RAB3DO95716 219 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 HLA-AP01891 365 aaKnown RBP11.47□□□□□ -0.57
USP39-217ENST00000491659 FRMD6-AS1P0C7T7 363 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 PTBP1P26599 531 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP39-217ENST00000491659 PIGPP57054 158 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 RND3P61587 244 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 IL18Q14116 193 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 SCGB2B2Q4G0G5 96 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 H2BFWTQ7Z2G1 175 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 OR4A16Q8NH70 328 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 DYNC2LI1Q8TCX1 351 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 DIRAS2Q96HU8 199 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 C6orf62Q9GZU0 229 aaPredicted RBP11.47□□□□□ -0.57
USP39-217ENST00000491659 NDUFA4L2Q9NRX3 87 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 DMRT1Q9Y5R6 373 aa11.47□□□□□ -0.57
USP39-217ENST00000491659 CD74P04233 296 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 PI3P19957 117 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 GPR183P32249 361 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 MEF2DQ14814 521 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 FAM106AQ4KMX7 169 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 STEAP1BQ6NZ63 245 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 GPHB5Q86YW7 130 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 CCDC71LQ8N9Z2 235 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 OR4D10Q8NGI6 311 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 ZFAND1Q8TCF1 268 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 SMIM4Q8WVI0 70 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 MRGPRFQ96AM1 343 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 SEC22AQ96IW7 307 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 COPZ2Q9P299 210 aa11.46□□□□□ -0.57
USP39-217ENST00000491659 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.57
USP39-217ENST00000491659 C2orf70A6NJV1 201 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 IGKV1-39P01597 117 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 IGKV1D-39P04432 117 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 IGHV4-30-4P0DP06 118 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 TERB2Q8NHR7 220 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 VN1R17PQ8TDU5 208 aa11.45□□□□□ -0.58
USP39-217ENST00000491659 ZNF320A2RRD8 509 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 A8MWP6 167 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 DISC1C4P0D8 188 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 CTDSPLO15194 276 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 ATG12O94817 140 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 CLEC3BP05452 202 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 FOLR2P14207 255 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 AKR1C2P52895 323 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
USP39-217ENST00000491659 PLET1Q6UQ28 207 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 Q8N1Y9 231 aa11.44□□□□□ -0.58
USP39-217ENST00000491659 OR13C8Q8NGS7 320 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms