RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TNFSF15O95150 251 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CXorf1O96002 111 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1-39P01597 117 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GYPAP02724 150 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1D-39P04432 117 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GPX1P07203 203 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CD55P08174 381 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CFC1BP0CG36 223 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CFC1P0CG37 223 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 STAG3L2P0CL84 134 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 STAG3L3P0CL85 134 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1-13P0DP09 117 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ESDP10768 282 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PSG2P11465 335 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 COX6A1P12074 109 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CD1BP29016 333 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CFHR2P36980 270 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OPRK1P41145 380 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RPL29P47914 159 aaKnown RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 LHX2P50458 406 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IDH3GP51553 393 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GPM6AP51674 278 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PRRX1P54821 245 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TPPP2P59282 170 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 HSPE1P61604 102 aaKnown RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 NUTF2P61970 127 aaKnown RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SELENOTP62341 195 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RUNX1Q01196 453 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PAX5Q02548 391 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC38A11Q08AI6 406 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM267Q0VDI3 215 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GAMTQ14353 236 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 HERPUD1Q15011 391 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 EFNB3Q15768 340 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ADIRFQ15847 76 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 USF2Q15853 346 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF726P1Q15940 193 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GABRA6Q16445 453 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RTL8BQ17RB0 113 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 AARDQ4LEZ3 155 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PDLIM3Q53GG5 364 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 C9orf152Q5JTZ5 239 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SPATA46Q5T0L3 261 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM162BQ5T6X4 162 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 FBXW9Q5XUX1 488 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GUSBP11Q6P575 273 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 INO80CQ6PI98 192 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RASL11AQ6T310 242 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF497Q6ZNH5 498 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 Q6ZS52 159 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 MOB1BQ7L9L4 216 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 P4HA3Q7Z4N8 544 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 C5orf24Q7Z6I8 188 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 HAPLN4Q86UW8 402 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 MCEMP1Q8IX19 187 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TUSC5Q8IXB3 177 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 DRAM1Q8N682 238 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF645Q8N7E2 425 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 STPG4Q8N801 248 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SUMF1Q8NBK3 374 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 NAXEQ8NCW5 288 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC24A4Q8NFF2 622 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2M7Q8NG81 312 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OR56B2PQ8NGI1 322 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10G8Q8NGN5 311 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OR51H1Q8NH63 302 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OR4A16Q8NH70 328 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IL1F10Q8WWZ1 152 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CACNG8Q8WXS5 425 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 DYRK2Q92630 601 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RDH5Q92781 318 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 APH1AQ96BI3 265 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 S100PBPQ96BU1 408 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 HARBI1Q96MB7 349 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 MS4A10Q96PG2 267 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 YPEL2Q96QA6 119 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 MIEN1Q9BRT3 115 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM147Q9BVK8 224 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RTL8AQ9BWD3 113 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 GNB1LQ9BYB4 327 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SRXN1Q9BYN0 137 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CSTL1Q9H114 145 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 OPN3Q9H1Y3 402 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PRO1933Q9H354 126 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RBKSQ9H477 322 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 VSIRQ9H7M9 311 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 UBE2ZQ9H832 354 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM9BQ9NQ34 198 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 KCNIP2Q9NS61 270 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM106BQ9NUM4 274 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ABI3Q9P2A4 366 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 B4GALT7Q9UBV7 327 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CACNG5Q9UF02 275 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PILRBQ9UKJ0 227 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 WDR83OSQ9Y284 106 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TET2Q6N021 2002 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 MED12Q93074 2177 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 USF3Q68DE3 2245 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SRCAPQ6ZRS2 3230 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms