RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 HSPE1P61604 102 aaKnown RBP12.38□□□□□ -0.43
TRA2A-208ENST00000490942 C4orf46Q504U0 113 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-208ENST00000490942 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 C10orf55Q5SWW7 151 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 NRARPQ7Z6K4 114 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 OR52E5Q8NH55 327 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 COQ8AQ8NI60 647 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 CITED2Q99967 270 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-208ENST00000490942 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-208ENST00000490942 OR51B2Q9Y5P1 312 aa12.38□□□□□ -0.43
TRA2A-208ENST00000490942 TCRBV4S1A1TA0A5B7 111 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 CGB1A6NKQ9 187 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 SOX15O60248 233 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 PTTG1O95997 202 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 DHFRP00374 187 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 IL5P05113 134 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 CDX1P47902 265 aaPredicted RBP12.37□□□□□ -0.43
TRA2A-208ENST00000490942 ANKRD55Q3KP44 614 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 TMEM65Q6PI78 240 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 PLET1Q6UQ28 207 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 MITD1Q8WV92 249 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 UBE2E2Q96LR5 201 aa12.37□□□□□ -0.43
TRA2A-208ENST00000490942 FYTTD1Q96QD9 318 aaKnown RBP12.37□□□□□ -0.43
TRA2A-208ENST00000490942 TRAV6A0A075B6T7 132 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 A0A1B0GU03 582 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 A0A1B0GW64 132 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 IGLC7A0M8Q6 106 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 E7EUB6 86 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 M0QZ24 198 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 PRAF2O60831 178 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 RBMXL2O75526 392 aaKnown RBP12.36□□□□□ -0.43
TRA2A-208ENST00000490942 PSMB6P28072 239 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 RAB9AP51151 201 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 RPL23AP62750 156 aaKnown RBP12.36□□□□□ -0.43
TRA2A-208ENST00000490942 PRCDQ00LT1 54 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 SRSF4Q08170 494 aaKnown RBP12.36□□□□□ -0.43
TRA2A-208ENST00000490942 DCTN2Q13561 401 aaKnown RBP12.36□□□□□ -0.43
TRA2A-208ENST00000490942 C2orf68Q2NKX9 166 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 OR1L6Q8NGR2 347 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 MARVELD1Q9BSK0 173 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 PDCD10Q9BUL8 212 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
TRA2A-208ENST00000490942 A0A0G2JRQ6 117 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 DBX1A6NMT0 343 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 CYB5BO43169 146 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 SULT1A3P0DMM9 295 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 SULT1A4P0DMN0 295 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 PF4V1P10720 104 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 HIST1H1BP16401 226 aaKnown RBP12.35□□□□□ -0.43
TRA2A-208ENST00000490942 CTRB1P17538 263 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 CTRB2Q6GPI1 263 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 Q6ZRM9 215 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 LYZL2Q7Z4W2 148 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 ZNF431Q8TF32 576 aaPredicted RBP12.35□□□□□ -0.43
TRA2A-208ENST00000490942 CASTOR1Q8WTX7 329 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 CACNG5Q9UF02 275 aa12.35□□□□□ -0.43
TRA2A-208ENST00000490942 TRBV9A0A0B4J1U6 114 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 A0A0G2JLM5 398 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 RPLP1P05386 114 aaKnown RBP12.34□□□□□ -0.43
TRA2A-208ENST00000490942 SPCS3P61009 180 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 RUNX1Q01196 453 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 KIAA0141Q14154 515 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-208ENST00000490942 SMCO1Q147U7 214 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 FAM209BQ5JX69 171 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 ZNF114Q8NC26 417 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 OR5T1Q8NG75 326 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 PLEKHA3Q9HB20 300 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 GPN1Q9HCN4 374 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-208ENST00000490942 PRR13Q9NZ81 148 aa12.34□□□□□ -0.43
TRA2A-208ENST00000490942 HMX3A6NHT5 357 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 FAM223BA6NKX1 122 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 FAM90A26D6RGX4 464 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 INMT-MINDY4F8WBC2 141 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 MYOD1P15172 320 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 AREGP15514 252 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 FAM223AQ8IWN6 122 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 ZNF491Q8N8L2 437 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 NECAP1Q8NC96 275 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 OR4F17Q8NGA8 305 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 OR4F4Q96R69 305 aa12.33□□□□□ -0.44
TRA2A-208ENST00000490942 PITX3O75364 302 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 IFNA21P01568 189 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 IFNA17P01571 189 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 TRGV3P03979 118 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 OR13C7P0DN81 318 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 TPPP2P59282 170 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 ERHP84090 104 aaKnown RBP12.32□□□□□ -0.44
TRA2A-208ENST00000490942 OR2C3Q8N628 320 aa12.32□□□□□ -0.44
TRA2A-208ENST00000490942 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms