RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 RAB32Q13637 225 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 SMCO1Q147U7 214 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 PSG5Q15238 335 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 DEFB112Q30KQ8 113 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 AARDQ4LEZ3 155 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 CCDC144NLQ6NUI1 221 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 C9orf139Q6ZV77 190 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 DMBX1Q8NFW5 382 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 OR4C13Q8NGP0 309 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 OR2T35Q8NGX2 323 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 OSR1Q8TAX0 266 aaPredicted RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 PPP1R1CQ8WVI7 109 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 C22orf15Q8WYQ4 148 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 FLYWCH2Q96CP2 140 aaKnown RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 HARBI1Q96MB7 349 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 QTRT1Q9BXR0 403 aaKnown RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 NMES1Q9C002 83 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 MS4A7Q9GZW8 240 aaPredicted RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 RANBP3Q9H6Z4 567 aaPredicted RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 COA4Q9NYJ1 87 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 BET1LQ9NYM9 111 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 GSKIPQ9P0R6 139 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 NUP50Q9UKX7 468 aa3.86□□□□□ -1.79
EPCAM-206ENST00000490733 RCL1Q9Y2P8 373 aaKnown RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 TEP1Q99973 2627 aaKnown RBP3.86□□□□□ -1.79
EPCAM-206ENST00000490733 C15orf61A6NNL5 157 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 K7EPK0 472 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 UPK2O00526 184 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 FCN1O00602 326 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 ST8SIA3O43173 380 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 SLC25A17O43808 307 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 KBTBD11O94819 623 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 SCAF4O95104 1147 aaKnown RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 NDUFA3O95167 84 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 MPC2O95563 127 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 SCGB1D1O95968 90 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 MOSP00540 346 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 HRASP01112 189 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 IFNA21P01568 189 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 C1QBP02746 253 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 AMY1AP04745 511 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 LYL1P12980 280 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 GYPEP15421 78 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 LGALS7P47929 136 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 NKX2-5P52952 324 aaPredicted RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 PAX9P55771 341 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 UBE2KP61086 200 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 RPS16P62249 146 aaKnown RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 POLR2GP62487 172 aaKnown RBP eCLIP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 HNF4GQ14541 408 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 PRSS8Q16651 343 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 LRRC37A5PQ49AS3 106 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 PDLIM3Q53GG5 364 aaPredicted RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 SPINK9Q5DT21 86 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 H2BFWTQ7Z2G1 175 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 FOXRED2Q8IWF2 684 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 FAM71E2Q8N5Q1 922 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 Q8N9W7 124 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 NPBQ8NG41 125 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 GRPEL2Q8TAA5 225 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 NANPQ8TBE9 248 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 TMEM167AQ8TBQ9 72 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 ASB13Q8WXK3 278 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 RRNAD1Q96FB5 475 aaKnown RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 SSX3Q99909 188 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 RNF5Q99942 180 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 PDCD10Q9BUL8 212 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 MLST8Q9BVC4 326 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 MAGT1Q9H0U3 335 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 FBXL15Q9H469 300 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 ZNF430Q9H8G1 570 aaPredicted RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 TMEM14BQ9NUH8 114 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 OR5AC2Q9NZP5 309 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 C11orf21Q9P2W6 132 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 HSPB7Q9UBY9 170 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 FOXA2Q9Y261 457 aaPredicted RBP3.85□□□□□ -1.79
EPCAM-206ENST00000490733 SIGLEC9Q9Y336 463 aa3.85□□□□□ -1.79
EPCAM-206ENST00000490733 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.79
EPCAM-206ENST00000490733 TEX50A0A1B0GTY4 177 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 A6NDX4 124 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 MSGN1A6NI15 193 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 SH2D7A6NKC9 451 aaPredicted RBP3.84□□□□□ -1.79
EPCAM-206ENST00000490733 H3BUX3 64 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 RRHO14718 337 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 NBR2O15453 112 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 CHST1O43916 411 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 DEDDO75618 318 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 ATG12O94817 140 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 OR2F2O95006 317 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 IGHV4-59P01825 116 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 OPN1MWP04001 364 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 FBP1P09467 338 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 FAM106CPP0CH98 169 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 OPN1MW2P0DN77 364 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 OPN1MW3P0DN78 364 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 SLC25A4P12235 298 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 TMEM11P17152 192 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 PSMB6P28072 239 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 BRS3P32247 399 aa3.84□□□□□ -1.79
EPCAM-206ENST00000490733 NKX2-1P43699 371 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms