RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 CMTM3Q96MX0 182 aa14.41□□□□□ -0.1
UPK3B-205ENST00000490360 SMPXQ9UHP9 88 aa14.41□□□□□ -0.1
UPK3B-205ENST00000490360 IFITM5A6NNB3 132 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 CD5P06127 495 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 HSMCR30P0CW71 290 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 POU2AF1Q16633 256 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 HACD4Q5VWC8 232 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 ZBTB34Q8NCN2 500 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 C21orf62Q9NYP8 219 aa14.4□□□□□ -0.1
UPK3B-205ENST00000490360 UPK2O00526 184 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 CA1P00915 261 aaPredicted RBP14.39□□□□□ -0.11
UPK3B-205ENST00000490360 SERPINE2P07093 398 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 NQO2P16083 231 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 PAFAH1B2P68402 229 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 FABP5Q01469 135 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 MLLT11Q13015 90 aaPredicted RBP14.39□□□□□ -0.11
UPK3B-205ENST00000490360 SLC25A24Q6NUK1 477 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 SPAG16Q8N0X2 631 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 RNF2Q99496 336 aa14.39□□□□□ -0.11
UPK3B-205ENST00000490360 TRAV1-2A0A0B4J238 106 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 HPRT1P00492 218 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 RELQ04864 619 aaPredicted RBP14.38□□□□□ -0.11
UPK3B-205ENST00000490360 CDNFQ49AH0 187 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 TMEM116Q8NCL8 245 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 CHRDL1Q9BU40 450 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 RHPN1-AS1Q9BWJ2 59 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 CCDC90BQ9GZT6 254 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 ATG5Q9H1Y0 275 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 ANXA10Q9UJ72 324 aa14.38□□□□□ -0.11
UPK3B-205ENST00000490360 TRAV10A0A0B4J240 114 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 IGHV7-4-1A0A0J9YVY3 117 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 C15orf61A6NNL5 157 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 CHEK1O14757 476 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 TRAPPC2P0DI81 140 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 TRAPPC2BP0DI82 140 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 OR13C7P0DN81 318 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 CATR1Q13166 79 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 RCN1Q15293 331 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 TMEM41BQ5BJD5 291 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 SCARB1Q8WTV0 552 aa14.37□□□□□ -0.11
UPK3B-205ENST00000490360 PRSS29PA6NIE9 313 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 DEFB4AO15263 64 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 ZNF207O43670 478 aaKnown RBP14.36□□□□□ -0.11
UPK3B-205ENST00000490360 SCGNO76038 276 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 DFFBO76075 338 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 ZNF124Q15973 351 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 OR10W1Q8NGF6 305 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 RNF126Q9BV68 326 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 PLEKHA2Q9HB19 425 aa14.36□□□□□ -0.11
UPK3B-205ENST00000490360 FAT2Q9NYQ8 4349 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 TFPI2P48307 235 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 ARPC4P59998 168 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 Q56UQ5 140 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 PVRIGQ6DKI7 326 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 Q8NAQ8 132 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 UBAC2Q8NBM4 344 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 DMBX1Q8NFW5 382 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 OR1L8Q8NGR8 309 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 OR10C1Q96KK4 312 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 TMEM140Q9NV12 185 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 ELF5Q9UKW6 265 aaPredicted RBP14.35□□□□□ -0.11
UPK3B-205ENST00000490360 TPRKBQ9Y3C4 175 aa14.35□□□□□ -0.11
UPK3B-205ENST00000490360 F11RQ9Y624 299 aaKnown RBP14.35□□□□□ -0.11
UPK3B-205ENST00000490360 IGHV4-4A0A075B6R2 117 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 IGHV3OR16-8A0A075B7F1 116 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 NUPL2O15504 423 aaKnown RBP14.34□□□□□ -0.11
UPK3B-205ENST00000490360 MIFP14174 115 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 MYL9P24844 172 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 OR10A3P58181 314 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 GNG2P59768 71 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 WT1-ASQ06250 92 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 SECTM1Q8WVN6 248 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 LSM10Q969L4 123 aaKnown RBP14.34□□□□□ -0.11
UPK3B-205ENST00000490360 DGCR14Q96DF8 476 aaKnown RBP14.34□□□□□ -0.11
UPK3B-205ENST00000490360 GPHA2Q96T91 129 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 VCXQ9H320 206 aa14.34□□□□□ -0.11
UPK3B-205ENST00000490360 TRAV14DV4A0A0A6YYC5 116 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 TRAV3A0A0B4J244 114 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 F8W735 103 aaPredicted RBP14.33□□□□□ -0.12
UPK3B-205ENST00000490360 SULT1C2O00338 296 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 CASQ2O14958 399 aaPredicted RBP14.33□□□□□ -0.12
UPK3B-205ENST00000490360 TNFSF12O43508 249 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 CTSGP08311 255 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 P0DMU3 169 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 FAM231AP0DMU4 169 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 FAM231CP0DMU5 169 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 RAB3BP20337 219 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 HLA-DMBP28068 263 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 FAM90A2PQ658T7 463 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 POM121L12Q8N7R1 296 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 OR13F1Q8NGS4 319 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 MGLLQ99685 303 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 CCL28Q9NRJ3 127 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 COMMD9Q9P000 198 aa14.33□□□□□ -0.12
UPK3B-205ENST00000490360 DNAH2Q9P225 4427 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 TRAV2A0A0B4J234 112 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 TEX50A0A1B0GTY4 177 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 K7EIM0 57 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 YIF1AO95070 293 aa14.32□□□□□ -0.12
UPK3B-205ENST00000490360 ERVK-16P61578 105 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms