RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, human

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH4-208	ENST00000490359	TERB2	Q8NHR7	220 aa		12.85	□□□□□ -0.35
LRCH4-208	ENST00000490359	ZFAND1	Q8TCF1	268 aa		12.85	□□□□□ -0.35
LRCH4-208	ENST00000490359	HINT2	Q9BX68	163 aa		12.85	□□□□□ -0.35
LRCH4-208	ENST00000490359	NXF2	Q9GZY0	626 aa	Known RBP	12.85	□□□□□ -0.35
LRCH4-208	ENST00000490359	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	TEX50	A0A1B0GTY4	177 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	FABP12	A6NFH5	140 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	C3orf84	H3BNL1	204 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	NDUFB8	O95169	186 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	AKAIN1	P0CW23	69 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	PTBP1	P26599	531 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	THOC7	Q6I9Y2	204 aa	Known RBP	12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	OR10W1	Q8NGF6	305 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	OR13C8	Q8NGS7	320 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	MRGPRF	Q96AM1	343 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	TSC22D3	Q99576	134 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	PALMD	Q9NP74	551 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	COPZ2	Q9P299	210 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	PRND	Q9UKY0	176 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	OR51B2	Q9Y5P1	312 aa		12.84	□□□□□ -0.35
LRCH4-208	ENST00000490359	DISC1	C4P0D8	188 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359		H0Y980	276 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	BMPR1B	O00238	502 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	GSTZ1	O43708	216 aa	Predicted RBP	12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	IGKV1-39	P01597	117 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	IGHV3-23	P01764	117 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	IGKV1D-39	P04432	117 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	FAM209B	Q5JX69	171 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	H2BFWT	Q7Z2G1	175 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	CCDC71L	Q8N9Z2	235 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR9G4	Q8NGQ1	327 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	MARCH1	Q8TCQ1	289 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	SEC22A	Q96IW7	307 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	SOST	Q9BQB4	213 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	RBM38	Q9H0Z9	239 aa	Known RBP	12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	FKBP11	Q9NYL4	201 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359		S4R3C0	116 aa		12.83	□□□□□ -0.36
LRCH4-208	ENST00000490359	TENM3	Q9P273	2699 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	IGLV11-55	A0A075B6I3	123 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR13C7	P0DN81	318 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	KLK9	Q2XQG4	91 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	HAPLN4	Q86UW8	402 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR4C16	Q8NGL9	310 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	EEF1AKMT3	Q96AZ1	226 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	TP53RK	Q96S44	253 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	ASCL2	Q99929	193 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	NDUFA4L2	Q9NRX3	87 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	KLK9	Q9UKQ9	250 aa		12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	LSM4	Q9Y4Z0	139 aa	Known RBP	12.82	□□□□□ -0.36
LRCH4-208	ENST00000490359	SORL1	Q92673	2214 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	C3orf85	A0A1B0GTC6	90 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	ANKRD20A5P	A0PJZ0	165 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	C15orf61	A6NNL5	157 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	PPP5D1	E7EU14	171 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	CYB5B	O43169	146 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	CTSD	P07339	412 aa	Predicted RBP	12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	SPN	P16150	400 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	MECP2	P51608	486 aa	Known RBP	12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	WT1-AS	Q06250	92 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	SGPP2	Q8IWX5	399 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	GDPD1	Q8N9F7	314 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR5B3	Q8NH48	314 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR4A16	Q8NH70	328 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	LSM10	Q969L4	123 aa	Known RBP	12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	TMEM14B	Q9NUH8	114 aa		12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	C14orf166	Q9Y224	244 aa	Known RBP	12.81	□□□□□ -0.36
LRCH4-208	ENST00000490359	DBX1	A6NMT0	343 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	GGCT	O75223	188 aa	Known RBP	12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	S100A5	P33763	92 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	TRIM16L	Q309B1	348 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	SP6	Q3SY56	376 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	CLEC19A	Q6UXS0	136 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	CXorf58	Q96LI9	332 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	CCDC140	Q96MF4	163 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	TMEM56	Q96MV1	263 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	PRRT1	Q99946	306 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	THYN1	Q9P016	225 aa		12.8	□□□□□ -0.36
LRCH4-208	ENST00000490359	MFSD2B	A6NFX1	497 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	ZNF701	M0R085	212 aa	Predicted RBP	12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	ATG12	O94817	140 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	IGLV1-51	P01701	117 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	HLA-A	P01891	365 aa	Known RBP	12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	ARL3	P36405	182 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	AKR1C2	P52895	323 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	PYDC2	Q56P42	97 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	SLC25A24	Q6NUK1	477 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	IL34	Q6ZMJ4	242 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR51S1	Q8NGJ8	323 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	THAP7	Q9BT49	309 aa	Predicted RBP	12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	PEMT	Q9UBM1	199 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	DMRT1	Q9Y5R6	373 aa		12.79	□□□□□ -0.36
LRCH4-208	ENST00000490359	TRBV7-1	A0A0A6YYK4	115 aa		12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	OR2C1	O95371	312 aa		12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	IGKV1-5	P01602	117 aa		12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	CSN3	P07498	182 aa		12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	GP9	P14770	177 aa		12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	SURF2	Q15527	256 aa	Predicted RBP	12.78	□□□□□ -0.36
LRCH4-208	ENST00000490359	IZUMO4	Q1ZYL8	232 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms