RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 AKIRIN2Q53H80 203 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 Q6ZS46 218 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 OR11H7Q8NGC8 314 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 HINT2Q9BX68 163 aa10.95□□□□□ -0.66
C9orf3-221ENST00000489562 TRAV41A0A0B4J266 112 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 CEBPZOSA8MTT3 80 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 TEX22C9J3V5 150 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 WRBO00258 174 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 SIX6O95475 246 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 HKR1P10072 659 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 EGR2P11161 476 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-221ENST00000489562 MYOD1P15172 320 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 CXCL3P19876 107 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 HOXA1P49639 335 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-221ENST00000489562 IL15RAQ13261 267 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 CXorf66Q5JRM2 361 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-221ENST00000489562 UNQ5815/PRO19632Q6UWF5 114 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 STPG2Q8N412 459 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 CIB3Q96Q77 187 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-221ENST00000489562 ZNF436Q9C0F3 470 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-221ENST00000489562 FBXO7Q9Y3I1 522 aa10.94□□□□□ -0.66
C9orf3-221ENST00000489562 NF1P21359 2839 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 A0A1B0GW64 132 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 IGLC7A0M8Q6 106 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 CGB1A6NKQ9 187 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 LINC01548A6NM66 108 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 E7EUB6 86 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 SYNGR2O43760 224 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 SCGB1D2O95969 90 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 GIPP09681 153 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-221ENST00000489562 SLC35B1P78383 322 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 ERHP84090 104 aaKnown RBP10.93□□□□□ -0.66
C9orf3-221ENST00000489562 ECSCRQ19T08 205 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 LFNGQ8NES3 379 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 DTD1Q8TEA8 209 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 CHAC2Q8WUX2 184 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
C9orf3-221ENST00000489562 HIPK2Q9H2X6 1198 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 RBKSQ9H477 322 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 SERTAD4Q9NUC0 356 aa10.93□□□□□ -0.66
C9orf3-221ENST00000489562 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-221ENST00000489562 NPIPB5A8MRT5 1133 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 NXPH3O95157 252 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 MBPP02686 304 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-221ENST00000489562 PET100P0DJ07 73 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 RAP2BP61225 183 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 C19orf54Q5BKX5 351 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 LINC01006Q8NI28 216 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 FAM110DQ8TAY7 271 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-221ENST00000489562 RAB40CQ96S21 281 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 HEYLQ9NQ87 328 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-221ENST00000489562 ZFHX3Q15911 3703 aa10.92□□□□□ -0.66
C9orf3-221ENST00000489562 hCG_2014768A0A024R1R8 64 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 H3BUA1 57 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 CYB5BO43169 146 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 RLN2P04090 185 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 CRYGCP07315 174 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 OR13C7P0DN81 318 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 AREGP15514 252 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 PVALBP20472 110 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-221ENST00000489562 PSMB6P28072 239 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 SNCAP37840 140 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 BCAP31P51572 246 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 SUB1P53999 127 aaKnown RBP eCLIP10.91□□□□□ -0.66
C9orf3-221ENST00000489562 ATP5IP56385 69 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-221ENST00000489562 SRSF2Q01130 221 aaKnown RBP10.91□□□□□ -0.66
C9orf3-221ENST00000489562 WT1-ASQ06250 92 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 FOXL1Q12952 345 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 KRTAP21-3Q3LHN1 58 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 SPINK9Q5DT21 86 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 NOXA1Q86UR1 476 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 OR2C3Q8N628 320 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 COMMD1Q8N668 190 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 ZNF114Q8NC26 417 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 OR10W1Q8NGF6 305 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 PPP1R1CQ8WVI7 109 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-221ENST00000489562 WNT10AQ9GZT5 417 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 MAGT1Q9H0U3 335 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 WSB1Q9Y6I7 421 aa10.91□□□□□ -0.66
C9orf3-221ENST00000489562 TMEM89A2RUT3 159 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 PSMB11A5LHX3 300 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 G3V318 75 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 K7EPK0 472 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 SSSCA1O60232 199 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 BRI3O95415 125 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 CTRB1P17538 263 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 HTR2BP41595 481 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 TAS2R30P59541 319 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 S100A10P60903 97 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 POLR2GP62487 172 aaKnown RBP eCLIP10.9□□□□□ -0.66
C9orf3-221ENST00000489562 RPP30P78346 268 aaKnown RBP10.9□□□□□ -0.66
C9orf3-221ENST00000489562 FGL1Q08830 312 aa10.9□□□□□ -0.66
C9orf3-221ENST00000489562 RAB32Q13637 225 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms