RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TSPAN9O75954 239 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 TFF1P04155 84 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 OR9G9P0C7N8 305 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 IL3RAP26951 378 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 MC5RP33032 325 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 OPRK1P41145 380 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 PPOXP50336 477 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 RAB13P51153 203 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 KRTAP10-9P60411 292 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 RAB31Q13636 194 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 LTC4SQ16873 150 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 RPL39P5Q59GN2 51 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 OR4A47Q6IF82 309 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 ADAM5Q6NVV9 412 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM88Q6PEY1 159 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 PDPNQ86YL7 162 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 LYG1Q8N1E2 194 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF383Q8NA42 475 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 OR5AN1Q8NGI8 311 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 LHX4Q969G2 390 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 TVP23CQ96ET8 276 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM204Q9BSN7 226 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 QTRT1Q9BXR0 403 aaKnown RBP6.91□□□□□ -1.3
VTI1A-207ENST00000489357 ENY2Q9NPA8 101 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 RPS10P5Q9NQ39 176 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 HEYLQ9NQ87 328 aaPredicted RBP6.91□□□□□ -1.3
VTI1A-207ENST00000489357 TCF19Q9Y242 345 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 TEX15Q9BXT5 2789 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 IGHV1-69-2A0A0G2JMI3 117 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 COLCA2A8K830 154 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 E7EQL1 145 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 H3BQ15 152 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 NUPL2O15504 423 aaKnown RBP6.9□□□□□ -1.3
VTI1A-207ENST00000489357 TGOLN2O43493 480 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 IFNA10P01566 189 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 NDUFB7P17568 137 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.3
VTI1A-207ENST00000489357 RAB5BP61020 215 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 CCL20P78556 96 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 HOXA4Q00056 320 aaPredicted RBP6.9□□□□□ -1.3
VTI1A-207ENST00000489357 PRCDQ00LT1 54 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 MEF2BQ02080 365 aaPredicted RBP6.9□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF726P1Q15940 193 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 ETV3LQ6ZN32 361 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 RPP25LQ8N5L8 163 aaKnown RBP6.9□□□□□ -1.3
VTI1A-207ENST00000489357 SLC24A4Q8NFF2 622 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 OR10G9Q8NGN4 311 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 OR10G7Q8NGN6 311 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 OR4C13Q8NGP0 309 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 OR9G1Q8NH87 305 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 SSX3Q99909 188 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 C19orf24Q9BVV8 132 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 NPVFQ9HCQ7 196 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 SLC35D1Q9NTN3 355 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 GNG13Q9P2W3 67 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 ARL2-SNX15V9GYD0 113 aa6.9□□□□□ -1.3
VTI1A-207ENST00000489357 PRRC2AP48634 2157 aaKnown RBP6.9□□□□□ -1.3
VTI1A-207ENST00000489357 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-207ENST00000489357 hCG_1809904A0A1W2PP81 198 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 A0A1W2PPE2 198 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 A0A1W2PR64 198 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 A0A1W2PRV1 198 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 UPK2O00526 184 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 SLC31A2O15432 143 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 KBTBD11O94819 623 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CT45A6P0DMU7 189 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CT45A5P0DMU8 189 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CT45A7P0DMV0 189 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 OR13C7P0DN81 318 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 SELLP14151 372 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 NFYBP25208 207 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 NPY1RP25929 384 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 HOXA1P49639 335 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-207ENST00000489357 HAGHQ16775 308 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 BSXQ3C1V8 233 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM155Q4W5P6 130 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 C2orf83Q53S99 150 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 FFAR4Q5NUL3 377 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 FAM201AQ5SY85 155 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 FAM53AQ6NSI3 398 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-207ENST00000489357 C1QL4Q86Z23 238 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CYB561D1Q8N8Q1 229 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 DEFB108BQ8NET1 73 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 OR13D1Q8NGV5 346 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 NANPQ8TBE9 248 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 IGFBPL1Q8WX77 278 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CACNG8Q8WXS5 425 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CCL17Q92583 94 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 RARRES2Q99969 163 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 CTDSP1Q9GZU7 261 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 PLEKHA3Q9HB20 300 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 BIN3Q9NQY0 253 aa6.89□□□□□ -1.31
VTI1A-207ENST00000489357 LSM4Q9Y4Z0 139 aaKnown RBP6.89□□□□□ -1.31
VTI1A-207ENST00000489357 USF3Q68DE3 2245 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms