RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TIMM50Q3ZCQ8 353 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 HES5Q5TA89 166 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 SLC25A24Q6NUK1 477 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 BPIFB6Q8NFQ5 453 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 PLCXD1Q9NUJ7 323 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.53
USP48-210ENST00000489108 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 F8W735 103 aaPredicted RBP11.71□□□□□ -0.53
USP48-210ENST00000489108 LIPKQ5VXJ0 399 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 C10orf67Q8IYJ2 551 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 MND1Q9BWT6 205 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 FKBP14Q9NWM8 211 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 V9GY05 133 aa11.71□□□□□ -0.53
USP48-210ENST00000489108 UPK2O00526 184 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 SPHARQ15513 63 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 CENPSQ8N2Z9 138 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 DHRSXQ8N5I4 330 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 UBAC2Q8NBM4 344 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
USP48-210ENST00000489108 COMMD5Q9GZQ3 224 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 LSM2Q9Y333 95 aaKnown RBP11.7□□□□□ -0.54
USP48-210ENST00000489108 AGRNO00468 2067 aa11.7□□□□□ -0.54
USP48-210ENST00000489108 IGHV3OR16-13A0A075B7E8 117 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 DEFB131BA0A096LNP1 70 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 IGHV3-74A0A0B4J1X5 117 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 CYB5BO43169 146 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 SERPINE2P07093 398 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 GNAO1P09471 354 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
USP48-210ENST00000489108 CTXN2P0C2S0 81 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 OR13C7P0DN81 318 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 MIFP14174 115 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 DEFB131AP59861 70 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 ZNF66Q6ZN08 573 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 ZNF767PQ75MW2 155 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 GDPD1Q8N9F7 314 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 AIFM2Q9BRQ8 373 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
USP48-210ENST00000489108 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 TNFSF12O43508 249 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 ARL6IP5O75915 188 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 AMBPP02760 352 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 CTSGP08311 255 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 DTYMKP23919 212 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 CALRP27797 417 aaKnown RBP11.68□□□□□ -0.54
USP48-210ENST00000489108 RPS25P62851 125 aaKnown RBP11.68□□□□□ -0.54
USP48-210ENST00000489108 WT1-ASQ06250 92 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 Q56UQ5 140 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 SPAG16Q8N0X2 631 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 ATP6V0BQ99437 205 aa11.68□□□□□ -0.54
USP48-210ENST00000489108 QTRT1Q9BXR0 403 aaKnown RBP11.68□□□□□ -0.54
USP48-210ENST00000489108 YIF1AO95070 293 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 RANBP1P43487 201 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 PAFAH1B2P68402 229 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 C12orf74Q32Q52 190 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 TCF24Q7RTU0 167 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 STHQ8IWL8 128 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 C8orf59Q8N0T1 100 aaPredicted RBP11.67□□□□□ -0.54
USP48-210ENST00000489108 MAPKAPK5-AS1Q8N8E1 139 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 GIMAP1Q8WWP7 306 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 UFD1Q92890 307 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 NDUFAF3Q9BU61 184 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 X6R8D5 127 aa11.67□□□□□ -0.54
USP48-210ENST00000489108 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 TEX50A0A1B0GTY4 177 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 K7EIM0 57 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 TRAPPC2P0DI81 140 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 TRAPPC2BP0DI82 140 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 CDNFQ49AH0 187 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 CNIH2Q6PI25 160 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 Q6ZR54 194 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 FAM24BQ8N5W8 94 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
USP48-210ENST00000489108 F11RQ9Y624 299 aaKnown RBP11.66□□□□□ -0.54
USP48-210ENST00000489108 METTL21EPA6NDL7 271 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 ERICH4A6NGS2 130 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 ZNF705EA8MWA4 302 aaPredicted RBP11.65□□□□□ -0.54
USP48-210ENST00000489108 DNASE2O00115 360 aaPredicted RBP11.65□□□□□ -0.54
USP48-210ENST00000489108 SULT1C2O00338 296 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 NUPL2O15504 423 aaKnown RBP11.65□□□□□ -0.54
USP48-210ENST00000489108 DFFBO76075 338 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 IFNA10P01566 189 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 RAB6AP20340 208 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 TAS2R31P59538 309 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 POU2AF1Q16633 256 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 ZNF773Q6PK81 442 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 LILRB2Q8N423 598 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 DGCR14Q96DF8 476 aaKnown RBP11.65□□□□□ -0.54
USP48-210ENST00000489108 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
USP48-210ENST00000489108 TMEM140Q9NV12 185 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms