RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 A0A1B0GW64 132 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 MARCH11A6NNE9 402 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 GSTZ1O43708 216 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 HLA-DMAP28067 261 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 OR2B8PP59922 312 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 SSBP1Q04837 148 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 KLK9Q2XQG4 91 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 HSD17B13Q7Z5P4 300 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 SMIM4Q8WVI0 70 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 CXorf58Q96LI9 332 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 FANCD2OSQ96PS1 177 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 QTRT1Q9BXR0 403 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 THYN1Q9P016 225 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 KLK9Q9UKQ9 250 aa10.51□□□□□ -0.73
SPTLC1-207ENST00000488921 IGLV11-55A0A075B6I3 123 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 TRBV7-1A0A0A6YYK4 115 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 A8MZ25 164 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 PPP5D1E7EU14 171 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 PGLYRP1O75594 196 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 REG1AP05451 166 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 IGHV4-30-4P0DP06 118 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 ARL3P36405 182 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 PPP5CP53041 499 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 AP3S2P59780 193 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 TRIQKQ629K1 86 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 C19orf35Q6ZS72 473 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 CADM3Q8N126 398 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 Q8N1Y9 231 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 FAM212BQ9NTI7 297 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 KLK11Q9UBX7 282 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
SPTLC1-207ENST00000488921 TRAV3A0A0B4J244 114 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 LGALS9O00182 355 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 NDUFB8O95169 186 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 TRAPPC2P0DI81 140 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 TRAPPC2BP0DI82 140 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 MYOD1P15172 320 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 LPAR6P43657 344 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 ZNF79Q15937 498 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 CLEC19AQ6UXS0 136 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 LYSMD2Q8IV50 215 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 CCDC140Q96MF4 163 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 CCDC32Q9BV29 185 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 SRRQ9GZT4 340 aa10.49□□□□□ -0.73
SPTLC1-207ENST00000488921 SNAPC5O75971 98 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 KRASP01116 189 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 IFNA6P05013 189 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 UCP3P55916 312 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 TAS2R19P59542 299 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 ZNF57Q68EA5 555 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 SLC38A6Q8IZM9 456 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 TOMM5Q8N4H5 51 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 TMEM229BQ8NBD8 167 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 FKBP11Q9NYL4 201 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 TECRQ9NZ01 308 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 DMRT1Q9Y5R6 373 aa10.48□□□□□ -0.73
SPTLC1-207ENST00000488921 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 A8MWP6 167 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 OR2C1O95371 312 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 IGHV3-23P01764 117 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 RPA2P15927 270 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 TBPP20226 339 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 FAUP35544 74 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 MECP2P51608 486 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 PHLDA2Q53GA4 152 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 RNASE10Q5GAN6 216 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 LSM10Q969L4 123 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 TMEM56Q96MV1 263 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 TM2D3Q9BRN9 247 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 C19orf73Q9NVV2 129 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 SLC2A8Q9NY64 477 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
SPTLC1-207ENST00000488921 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 IZUMO1RA6ND01 250 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 MFSD2BA6NFX1 497 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 CENPXA8MT69 81 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 C3orf84H3BNL1 204 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 RAB3DO95716 219 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 HLA-AP01891 365 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 SERPINE2P07093 398 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 AKAIN1P0CW23 69 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 OR13C7P0DN81 318 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 FOLR2P14207 255 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 G6PCP35575 357 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 MEF2DQ14814 521 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 ZNF585BQ52M93 769 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 STEAP1BQ6NZ63 245 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 TBC1D26Q86UD7 250 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 OR10W1Q8NGF6 305 aa10.46□□□□□ -0.73
SPTLC1-207ENST00000488921 OR1L6Q8NGR2 347 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms