RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CMC4P56277 68 aaPredicted RBP14.05□□□□□ -0.16
GGPS1-206ENST00000488594 BEST4Q8NFU0 473 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 DMBX1Q8NFW5 382 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 OR5B3Q8NH48 314 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 C20orf24Q9BUV8 137 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 CSTL1Q9H114 145 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 PLEKHA2Q9HB19 425 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 TMEM140Q9NV12 185 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 TRAV3A0A0B4J244 114 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 C15orf62A8K5M9 175 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 S1PR2O95136 353 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 PPYP01298 95 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 SERPINE2P07093 398 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 TRAPPC2P0DI81 140 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 TRAPPC2BP0DI82 140 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 FCGR2BP31994 310 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-206ENST00000488594 SLC25A24Q6NUK1 477 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 OR10W1Q8NGF6 305 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 SLC5A7Q9GZV3 580 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 C21orf62Q9NYP8 219 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 BLOC1S6Q9UL45 172 aa14.04□□□□□ -0.16
GGPS1-206ENST00000488594 MPTX1A8MV57 137 aa14.03□□□□□ -0.16
GGPS1-206ENST00000488594 IFNA4P05014 189 aa14.03□□□□□ -0.16
GGPS1-206ENST00000488594 CTSDP07339 412 aaPredicted RBP14.03□□□□□ -0.16
GGPS1-206ENST00000488594 TCTAP57738 103 aa14.03□□□□□ -0.16
GGPS1-206ENST00000488594 C11orf45Q8TAV5 145 aa14.03□□□□□ -0.16
GGPS1-206ENST00000488594 RARRES2Q99969 163 aa14.03□□□□□ -0.16
GGPS1-206ENST00000488594 C11orf68Q9H3H3 251 aaKnown RBP14.03□□□□□ -0.16
GGPS1-206ENST00000488594 COMMD9Q9P000 198 aa14.03□□□□□ -0.16
GGPS1-206ENST00000488594 SMIM30A4D0T7 59 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 WT1-ASQ06250 92 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 RBMS2Q15434 407 aaKnown RBP14.02□□□□□ -0.17
GGPS1-206ENST00000488594 TPRA1Q86W33 373 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 OR1L8Q8NGR8 309 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 SCARB1Q8WTV0 552 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 BORCS5Q969J3 196 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 LSM10Q969L4 123 aaKnown RBP14.02□□□□□ -0.17
GGPS1-206ENST00000488594 CHRDL1Q9BU40 450 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 DAPK2Q9UIK4 370 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 F11RQ9Y624 299 aaKnown RBP14.02□□□□□ -0.17
GGPS1-206ENST00000488594 HERC2O95714 4834 aa14.02□□□□□ -0.17
GGPS1-206ENST00000488594 FGF9P31371 208 aaPredicted RBP14.01□□□□□ -0.17
GGPS1-206ENST00000488594 ADMP35318 185 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 ERVK-16P61578 105 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 ZNF773Q6PK81 442 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 HOGA1Q86XE5 327 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 APRG1Q8IVJ8 170 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 OR51H1Q8NH63 302 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 RHBDL2Q9NX52 303 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 SMPXQ9UHP9 88 aa14.01□□□□□ -0.17
GGPS1-206ENST00000488594 TEX50A0A1B0GTY4 177 aa14□□□□□ -0.17
GGPS1-206ENST00000488594 NANOS2P60321 138 aaKnown RBP14□□□□□ -0.17
GGPS1-206ENST00000488594 RELQ04864 619 aaPredicted RBP14□□□□□ -0.17
GGPS1-206ENST00000488594 AADACL3Q5VUY0 350 aa14□□□□□ -0.17
GGPS1-206ENST00000488594 UBAC2Q8NBM4 344 aa14□□□□□ -0.17
GGPS1-206ENST00000488594 LGALS14Q8TCE9 139 aa14□□□□□ -0.17
GGPS1-206ENST00000488594 FBXL17Q9UF56 701 aa14□□□□□ -0.17
GGPS1-206ENST00000488594 ETV7Q9Y603 341 aa14□□□□□ -0.17
GGPS1-206ENST00000488594 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 F8W735 103 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-206ENST00000488594 ZNF207O43670 478 aaKnown RBP13.99□□□□□ -0.17
GGPS1-206ENST00000488594 PTHLHP12272 177 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 SCAND1P57086 179 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 FXYD4P59646 89 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 Q56UQ5 140 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 ZNF818PQ6ZRF7 136 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 CADM3Q8N126 398 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 GVQW1Q8N7I0 195 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 OR11H2Q8NH07 326 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 C2CD4CQ8TF44 421 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 NRG4Q8WWG1 115 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 GIMAP1Q8WWP7 306 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 RNF2Q99496 336 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 NDUFA4L2Q9NRX3 87 aa13.99□□□□□ -0.17
GGPS1-206ENST00000488594 TXNL4BQ9NX01 149 aaKnown RBP13.99□□□□□ -0.17
GGPS1-206ENST00000488594 IGHV7-4-1A0A0J9YVY3 117 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 MARCH11A6NNE9 402 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 K7EIM0 57 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 MRPS14O60783 128 aaKnown RBP13.98□□□□□ -0.17
GGPS1-206ENST00000488594 MFAP2P55001 183 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 SFXN4Q6P4A7 337 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 TMEM116Q8NCL8 245 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 CMTM3Q96MX0 182 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 RHPN1-AS1Q9BWJ2 59 aa13.98□□□□□ -0.17
GGPS1-206ENST00000488594 RRP15Q9Y3B9 282 aaKnown RBP13.98□□□□□ -0.17
GGPS1-206ENST00000488594 TRAV18A0A075B6X5 111 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 A0A0A6YYH2 397 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 IGHV3-21A0A0B4J1V1 117 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 A6NJ64 397 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 CHEK1O14757 476 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 NUPL2O15504 423 aaKnown RBP13.97□□□□□ -0.17
GGPS1-206ENST00000488594 CTSGP08311 255 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 TMEM17Q86X19 198 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 OR10C1Q96KK4 312 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 HINT2Q9BX68 163 aa13.97□□□□□ -0.17
GGPS1-206ENST00000488594 SNAPC5O75971 98 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 CD5P06127 495 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 PRR20EP86478 221 aa13.96□□□□□ -0.17
GGPS1-206ENST00000488594 PRR20CP86479 221 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms