RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 DIRAS3O95661 229 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 PPYP01298 95 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 EIF4EP06730 217 aaKnown RBP4.48□□□□□ -1.69
CDHR3-213ENST00000488386 FRMD6-AS1P0C7T7 363 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 RANBP1P43487 201 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 RFX2P48378 723 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 TAS2R20P59543 309 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 VBP1P61758 197 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 RHOGP84095 191 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 EXOSC2Q13868 293 aaKnown RBP4.48□□□□□ -1.69
CDHR3-213ENST00000488386 ARL6IP1Q15041 203 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 C10orf25Q5T742 122 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF343Q6P1L6 599 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 IL34Q6ZMJ4 242 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 PUSL1Q8N0Z8 303 aaKnown RBP4.48□□□□□ -1.69
CDHR3-213ENST00000488386 SAMD12Q8N8I0 201 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 TSPAN14Q8NG11 270 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 OR9G4Q8NGQ1 327 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 OR6Q1Q8NGQ2 317 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 OR51H1Q8NH63 302 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 ADTRPQ96IZ2 230 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 SLC5A7Q9GZV3 580 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 FXYD6Q9H0Q3 95 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 RANGRFQ9HD47 186 aaPredicted RBP4.48□□□□□ -1.69
CDHR3-213ENST00000488386 EHFQ9NZC4 300 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 COMMD3Q9UBI1 195 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 PEF1Q9UBV8 284 aaKnown RBP4.48□□□□□ -1.69
CDHR3-213ENST00000488386 ETV7Q9Y603 341 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 SMAD5-AS1Q9Y6J3 95 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 IGHV3-21A0A0B4J1V1 117 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 IGHV3-35A0A0C4DH35 117 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 A0A0G2JLM5 398 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 H3BUA1 57 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 SCGNO76038 276 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 OR2A4O95047 310 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 S1PR2O95136 353 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 NDUFB8O95169 186 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 RLN1P04808 185 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 CSN3P07498 182 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 CTXN2P0C2S0 81 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 IGHV4-30-4P0DP06 118 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 HLA-DMAP28067 261 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 RPL27AP46776 148 aaKnown RBP4.47□□□□□ -1.69
CDHR3-213ENST00000488386 INSL3P51460 131 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 ATP5G2Q06055 141 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 KLF5Q13887 457 aaPredicted RBP4.47□□□□□ -1.69
CDHR3-213ENST00000488386 RBMS2Q15434 407 aaKnown RBP4.47□□□□□ -1.69
CDHR3-213ENST00000488386 RPEL1Q2QD12 228 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 C15orf32Q32M92 178 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 TIMM50Q3ZCQ8 353 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 UBE2NLQ5JXB2 153 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 TMEM69Q5SWH9 247 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 AADACL3Q5VUY0 350 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 OR4A47Q6IF82 309 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 CLEC19AQ6UXS0 136 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 ADAMTSL5Q6ZMM2 481 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 ANKRD13BQ86YJ7 626 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 SNX29P2Q8IUI4 249 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 MMD2Q8IY49 270 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 SPAG16Q8N0X2 631 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 NRACQ8N912 160 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 OR4S2Q8NH73 311 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 CACNG8Q8WXS5 425 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 OR2A7Q96R45 310 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF2Q9BSG1 426 aaPredicted RBP4.47□□□□□ -1.69
CDHR3-213ENST00000488386 FUNDC2Q9BWH2 189 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 WFDC10AQ9H1F0 79 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 RETNQ9HD89 108 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 HRASLSQ9HDD0 168 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 IFT46Q9NQC8 304 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 DIABLOQ9NR28 239 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 MRPS7Q9Y2R9 242 aaKnown RBP4.47□□□□□ -1.69
CDHR3-213ENST00000488386 NSG2Q9Y328 171 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 PRELID3BQ9Y3B1 194 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 STARD9Q9P2P6 4700 aa4.47□□□□□ -1.69
CDHR3-213ENST00000488386 A0A087WXM4 84 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.46□□□□□ -1.7
CDHR3-213ENST00000488386 TRBV9A0A0B4J1U6 114 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 DPPA5A6NC42 116 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 MFSD2BA6NFX1 497 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 XRCC3O43542 346 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 HPGDSO60760 199 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 OR2C1O95371 312 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 TNFAIP8O95379 198 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 ZNF735P0CB33 412 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 SMIM18P0DKX4 95 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 ZP3P21754 424 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 GNRHRP30968 328 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 HERV-K104P61576 105 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 PHLDA2Q53GA4 152 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 TTC9CQ8N5M4 171 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 OR5AP2Q8NGF4 316 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 OR10W1Q8NGF6 305 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 TMEM167AQ8TBQ9 72 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 TRIM63Q969Q1 353 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 S100A16Q96FQ6 103 aaKnown RBP4.46□□□□□ -1.7
CDHR3-213ENST00000488386 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
CDHR3-213ENST00000488386 RCHY1Q96PM5 261 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms