RNA–Protein interactions for RNA: ENST00000488227.1

RALY-208, Transcript of RALY heterogeneous nuclear ribonucleoprotein, human

TSL 3

Gene RALY, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALY-208	ENST00000488227	PITX3	O75364	302 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	IZUMO4	Q1ZYL8	232 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	IAH1	Q2TAA2	248 aa	Predicted RBP	11.22	□□□□□ -0.61
RALY-208	ENST00000488227	NIPBL	Q6KC79	2804 aa	eCLIP	11.22	□□□□□ -0.61
RALY-208	ENST00000488227	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.22	□□□□□ -0.61
RALY-208	ENST00000488227	OR5M8	Q8NGP6	311 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	ASB13	Q8WXK3	278 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	C2orf50	Q96LR7	162 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	FYTTD1	Q96QD9	318 aa	Known RBP	11.22	□□□□□ -0.61
RALY-208	ENST00000488227	ZFP57	Q9NU63	452 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	SERTAD4	Q9NUC0	356 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	HSPB7	Q9UBY9	170 aa		11.22	□□□□□ -0.61
RALY-208	ENST00000488227	C13orf42	A0A1B0GVH6	325 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	NPIPB5	A8MRT5	1133 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	FAM25E	A8MYX2	175 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	GOSR2	O14653	212 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	ERH	P84090	104 aa	Known RBP	11.21	□□□□□ -0.61
RALY-208	ENST00000488227	TNFRSF9	Q07011	255 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	ECSCR	Q19T08	205 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	C10orf55	Q5SWW7	151 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	UNQ5815/PRO19632	Q6UWF5	114 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	WNT10A	Q9GZT5	417 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	RNF114	Q9Y508	228 aa		11.21	□□□□□ -0.61
RALY-208	ENST00000488227	PSMB11	A5LHX3	300 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	TEX22	C9J3V5	150 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227		H3BUA1	57 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	OPN1MW	P04001	364 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	OPN1MW2	P0DN77	364 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	OPN1MW3	P0DN78	364 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	EGR2	P11161	476 aa	Predicted RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	NKX2-1	P43699	371 aa	Predicted RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	HOXA1	P49639	335 aa	Predicted RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	SRSF2	Q01130	221 aa	Known RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	TTC9C	Q8N5M4	171 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	LFNG	Q8NES3	379 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	OR1L6	Q8NGR2	347 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	OR10C1	Q96KK4	312 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	CIB3	Q96Q77	187 aa	Predicted RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	FAM103A1	Q9BTL3	118 aa	Known RBP	11.2	□□□□□ -0.62
RALY-208	ENST00000488227	HINT2	Q9BX68	163 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	NMES1	Q9C002	83 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	HIPK2	Q9H2X6	1198 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	MGAT4C	Q9UBM8	478 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	JMJD1C	Q15652	2540 aa		11.2	□□□□□ -0.62
RALY-208	ENST00000488227	LINC01548	A6NM66	108 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	CEBPZOS	A8MTT3	80 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	WRB	O00258	174 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	CCS	O14618	274 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	BRI3	O95415	125 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	SUB1	P53999	127 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
RALY-208	ENST00000488227	ATP5I	P56385	69 aa	Predicted RBP	11.19	□□□□□ -0.62
RALY-208	ENST00000488227	RRAS2	P62070	204 aa	Predicted RBP	11.19	□□□□□ -0.62
RALY-208	ENST00000488227	TMEM95	Q3KNT9	176 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	KRTAP24-1	Q3LI83	254 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	C19orf54	Q5BKX5	351 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	TEX38	Q6PEX7	206 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227		Q6ZNX1	250 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	NOXA1	Q86UR1	476 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	OR4D5	Q8NGN0	318 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.19	□□□□□ -0.62
RALY-208	ENST00000488227	NOL4L	Q96MY1	436 aa	Predicted RBP	11.19	□□□□□ -0.62
RALY-208	ENST00000488227	C19orf24	Q9BVV8	132 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	GSKIP	Q9P0R6	139 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	FBXO7	Q9Y3I1	522 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	WSB1	Q9Y6I7	421 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	TNC	P24821	2201 aa		11.19	□□□□□ -0.62
RALY-208	ENST00000488227	C2CD3	Q4AC94	2353 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	IGLC7	A0M8Q6	106 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	MPTX1	A8MV57	137 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	IGHG4	P01861	327 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	CRYGC	P07315	174 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	ELANE	P08246	267 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	OR13C7	P0DN81	318 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	MYOD1	P15172	320 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	HIST1H1B	P16401	226 aa	Known RBP	11.18	□□□□□ -0.62
RALY-208	ENST00000488227	MDK	P21741	143 aa	Predicted RBP	11.18	□□□□□ -0.62
RALY-208	ENST00000488227	PSMB6	P28072	239 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	PROK1	P58294	105 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	RPP30	P78346	268 aa	Known RBP	11.18	□□□□□ -0.62
RALY-208	ENST00000488227	ID3	Q02535	119 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	CFHR3	Q02985	330 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	FOXE3	Q13461	319 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	KLHDC1	Q8N7A1	406 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	ZNF114	Q8NC26	417 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	OR4X2	Q8NGF9	303 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	DTD1	Q8TEA8	209 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227	SLA2	Q9H6Q3	261 aa		11.18	□□□□□ -0.62
RALY-208	ENST00000488227		A0A1B0GW64	132 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	HMX3	A6NHT5	357 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	CGB1	A6NKQ9	187 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227		E7EUB6	86 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227		G3V318	75 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	SYNGR2	O43760	224 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	DEFA4	P12838	97 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	CTRB1	P17538	263 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	PPIF	P30405	207 aa	Known RBP	11.17	□□□□□ -0.62
RALY-208	ENST00000488227	SNCA	P37840	140 aa		11.17	□□□□□ -0.62
RALY-208	ENST00000488227	HTR2B	P41595	481 aa		11.17	□□□□□ -0.62

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