RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 DIRAS2Q96HU8 199 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 MGLLQ99685 303 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 ANAPC13Q9BS18 74 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 OR51E2Q9H255 320 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 TUBA4BQ9H853 241 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 CACYBPQ9HB71 228 aaKnown RBP2.04□□□□□ -2.08
USP48-209ENST00000487880 POPDC3Q9HBV1 291 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 TMEM138Q9NPI0 162 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 NIT2Q9NQR4 276 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 NDUFB11Q9NX14 153 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 FBXL3Q9UKT7 428 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 POFUT2Q9Y2G5 429 aa2.04□□□□□ -2.08
USP48-209ENST00000487880 SCN9AQ15858 1988 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 NAV1Q8NEY1 1877 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 TAF1LQ8IZX4 1826 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 ARFGEF1Q9Y6D6 1849 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 SHANK3Q9BYB0 1731 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 A0A0D9SG52 128 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 LOC100506127A0A0U1RQW1 187 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 A0A1W2PQL4 384 aaPredicted RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 PGPA6NDG6 321 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 RFPL4AA6NLU0 287 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 A8MT66 165 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 SNRPGP15A8MWD9 76 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 C1orf196B1AJZ1 125 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 ZNF879B4DU55 563 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 MCRIP1C9JLW8 97 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 RFPL4AL1F8VTS6 287 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 MKRN2OSH3BPM6 223 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 M0QZK8 103 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 CXCR6O00574 342 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 GPR171O14626 319 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 NDUFS6O75380 124 aaKnown RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 GADD45GO95257 159 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 CSTAP01040 98 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 APOC3P02656 99 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 IL5P05113 134 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 GABRA1P14867 456 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 PTNP21246 168 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 NFYAP23511 347 aaPredicted RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 CRABP1P29762 137 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 AGTR1P30556 359 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 RAB5CP51148 216 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 DAPP51397 102 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 POLR2JP52435 117 aaKnown RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 RAB38P57729 211 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 OR4D2P58180 307 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 AP3S2P59780 193 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 CDC42P60953 191 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 RAB2AP61019 212 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 SNRPGP62308 76 aaKnown RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 DYNLT1P63172 113 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 EIF5AP63241 154 aaKnown RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 PAFAH1B3Q15102 231 aaKnown RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 HMGN3Q15651 99 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 VAMP3Q15836 100 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 CD200R1LQ6Q8B3 271 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 DCXRQ7Z4W1 244 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 LRRC28Q86X40 367 aaPredicted RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 OR6V1Q8N148 313 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 Q8NDZ9 215 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 PXT1Q8NFP0 134 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 OR9I1Q8NGQ6 314 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 LGALS14Q8TCE9 139 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 TWIST2Q8WVJ9 160 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 LCN9Q8WX39 176 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 KCTD7Q96MP8 289 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 PFDN5Q99471 154 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 SEC11CQ9BY50 192 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 XKR8Q9H6D3 395 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 RASL12Q9NYN1 266 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 CALML5Q9NZT1 146 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 NAGKQ9UJ70 344 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 LSM2Q9Y333 95 aaKnown RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 POLR3HQ9Y535 204 aaPredicted RBP2.03□□□□□ -2.08
USP48-209ENST00000487880 DNAJC15Q9Y5T4 150 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 DOCK6Q96HP0 2047 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 OTOFQ9HC10 1997 aa2.03□□□□□ -2.08
USP48-209ENST00000487880 ITGB4P16144 1822 aa2.03□□□□□ -2.09
USP48-209ENST00000487880 PHLPP1O60346 1717 aa2.03□□□□□ -2.09
USP48-209ENST00000487880 ZFC3H1O60293 1989 aaKnown RBP2.02□□□□□ -2.09
USP48-209ENST00000487880 A0A096LPI6 279 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 IGHV1-45A0A0A0MS14 117 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 TRDV1A0A1B0GX56 115 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 A6NED7 52 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 C17orf51A8MQB3 221 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 DISC1C4P0D8 188 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 HSBP1L1C9JCN9 74 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 G3V3Q6 166 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 TSTD3H0UI37 97 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 ITGB1BP1O14713 200 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 TOX3O15405 576 aaPredicted RBP2.02□□□□□ -2.09
USP48-209ENST00000487880 TCF21O43680 179 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 GSTZ1O43708 216 aaPredicted RBP2.02□□□□□ -2.09
USP48-209ENST00000487880 FADS1O60427 444 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 HPGDSO60760 199 aa2.02□□□□□ -2.09
USP48-209ENST00000487880 POP7O75817 140 aaKnown RBP2.02□□□□□ -2.09
USP48-209ENST00000487880 NSA2O95478 260 aaKnown RBP2.02□□□□□ -2.09
USP48-209ENST00000487880 CFDP00746 253 aaPredicted RBP2.02□□□□□ -2.09
USP48-209ENST00000487880 IFNA17P01571 189 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms