RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 TMEM147Q9BVK8 224 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 HINT2Q9BX68 163 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 ZNF430Q9H8G1 570 aaPredicted RBP4.95□□□□□ -1.62
VAMP3-203ENST00000487194 NDUFA4L2Q9NRX3 87 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 UQCC1Q9NVA1 299 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 MED9Q9NWA0 146 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 METTL1Q9UBP6 276 aaKnown RBP4.95□□□□□ -1.62
VAMP3-203ENST00000487194 PFDN2Q9UHV9 154 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 SIGLEC9Q9Y336 463 aa4.95□□□□□ -1.62
VAMP3-203ENST00000487194 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
VAMP3-203ENST00000487194 TACC2O95359 2948 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 A0A096LNT2 108 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 C15orf62A8K5M9 175 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 PMS2P5A8MQ11 134 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 ZNF705EA8MWA4 302 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 NUDT19A8MXV4 375 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 FNDC10F2Z333 226 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 TRIM77I1YAP6 450 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 RRHO14718 337 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 NBR2O15453 112 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 SOX15O60248 233 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 FBXO24O75426 580 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 NDUFA3O95167 84 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 IGKV1D-33P01593 117 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 IGKV1-33P01594 117 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 IFNA4P05014 189 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 FAM157CP0CG43 387 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 ATP6V0CP27449 155 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 SAA4P35542 130 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 RPL27AP46776 148 aaKnown RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 COMPP49747 757 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 SULT1A2P50226 295 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 BPIFB3P59826 476 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 DLK1P80370 383 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 ARL16Q0P5N6 197 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 EBI3Q14213 229 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 HES1Q14469 280 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 PLGLAQ15195 96 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 MMDQ15546 238 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 VWC2Q2TAL6 325 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 LRRC75BQ2VPJ9 315 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 C2orf83Q53S99 150 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 FAM74A1Q5RGS3 127 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 ETV3LQ6ZN32 361 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 HAPLN4Q86UW8 402 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 PPP1R27Q86WC6 154 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 SLC7A5P1Q8MH63 180 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 HSD17B11Q8NBQ5 300 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 OR2G3Q8NGZ4 309 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 EAF1Q96JC9 268 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 RITA1Q96K30 269 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 SRSF8Q9BRL6 282 aaKnown RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 PSMG3Q9BT73 122 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 REG4Q9BYZ8 158 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 WDR61Q9GZS3 305 aaKnown RBP4.94□□□□□ -1.62
VAMP3-203ENST00000487194 C7orf69Q9H7B7 122 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 PARP11Q9NR21 331 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 HIF1ANQ9NWT6 349 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 C1RLQ9NZP8 487 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 TIMM9Q9Y5J7 89 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 POLQO75417 2590 aa4.94□□□□□ -1.62
VAMP3-203ENST00000487194 TNCP24821 2201 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 ABCA2Q9BZC7 2435 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 SETD2Q9BYW2 2564 aaPredicted RBP4.93□□□□□ -1.62
VAMP3-203ENST00000487194 C17orf112F2Z3M2 114 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 MPDU1O75352 247 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 CA2P00918 260 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 PRH1P02810 166 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 OPN1MWP04001 364 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 OPN1MW2P0DN77 364 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 OPN1MW3P0DN78 364 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 MYOD1P15172 320 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 TMEM11P17152 192 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 S100A1P23297 94 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 CNTFRP26992 372 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 SERF2P84101 59 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 HNF4GQ14541 408 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 TNXAQ16473 311 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 BSXQ3C1V8 233 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 AKR1C8PQ5T2L2 129 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.93□□□□□ -1.622e-8■■■□□ 17.7
VAMP3-203ENST00000487194 DPPA3Q6W0C5 159 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 COMMD7Q86VX2 200 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 DYNAPQ8N1N2 210 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 Q8N6K4 173 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 ZNF709Q8N972 641 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 RNASEH2CQ8TDP1 164 aaKnown RBP4.93□□□□□ -1.62
VAMP3-203ENST00000487194 TAF15Q92804 592 aaKnown RBP eCLIP4.93□□□□□ -1.62
VAMP3-203ENST00000487194 MEGF9Q9H1U4 602 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 FBXL15Q9H469 300 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 KCNIP2Q9NS61 270 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 FAM96BQ9Y3D0 163 aa4.93□□□□□ -1.62
VAMP3-203ENST00000487194 CRYBG3Q68DQ2 2970 aa4.92□□□□□ -1.62
VAMP3-203ENST00000487194 TET2Q6N021 2002 aaPredicted RBP4.92□□□□□ -1.62
VAMP3-203ENST00000487194 TRAV40A0A0B4J280 105 aa4.92□□□□□ -1.62
VAMP3-203ENST00000487194 UBE2L5PA0A1B0GUS4 154 aa4.92□□□□□ -1.62
VAMP3-203ENST00000487194 SMCO3A2RU48 225 aa4.92□□□□□ -1.62
VAMP3-203ENST00000487194 NCBP2LA6PVI3 153 aaKnown RBP4.92□□□□□ -1.62
VAMP3-203ENST00000487194 PRSS46E5RG02 174 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms