RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TRAPPC2P0DI81 140 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 TRAPPC2BP0DI82 140 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 OR13C7P0DN81 318 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 OR5H2Q8NGV7 314 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 HINT2Q9BX68 163 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 COMMD9Q9P000 198 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 NSG2Q9Y328 171 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 DNAH1Q9P2D7 4330 aa18.42■□□□□ 0.54
LIME1-206ENST00000487026 MARCH11A6NNE9 402 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 NAT1P18440 290 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 F2RP25116 425 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 PTBP1P26599 531 aaKnown RBP eCLIP18.41■□□□□ 0.54
LIME1-206ENST00000487026 PRSS3P35030 304 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 WT1-ASQ06250 92 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 ZNF585BQ52M93 769 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 BTNL8Q6UX41 500 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 FCAMRQ8WWV6 532 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 BORCS5Q969J3 196 aa18.41■□□□□ 0.54
LIME1-206ENST00000487026 SRSF8Q9BRL6 282 aaKnown RBP18.41■□□□□ 0.54
LIME1-206ENST00000487026 IGHV3-21A0A0B4J1V1 117 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 KRASP01116 189 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 ERVK-16P61578 105 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 SLC25A24Q6NUK1 477 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 PLET1Q6UQ28 207 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 SLC16A13Q7RTY0 426 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 LYSMD2Q8IV50 215 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 TSPAN14Q8NG11 270 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 OR52B4Q8NGK2 314 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 FXYD6Q9H0Q3 95 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 THYN1Q9P016 225 aa18.4■□□□□ 0.54
LIME1-206ENST00000487026 A0A087WXM4 84 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 EIF4EP06730 217 aaKnown RBP18.39■□□□□ 0.53
LIME1-206ENST00000487026 SERPINE2P07093 398 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 HLA-DMAP28067 261 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 G6PCP35575 357 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 TAS2R46P59540 309 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 GDPD1Q8N9F7 314 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 OR1L8Q8NGR8 309 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 OR6F1Q8NGZ6 308 aa18.39■□□□□ 0.53
LIME1-206ENST00000487026 DGCR14Q96DF8 476 aaKnown RBP18.39■□□□□ 0.53
LIME1-206ENST00000487026 HRH1P35367 487 aa18.38■□□□□ 0.53
LIME1-206ENST00000487026 MFAP2P55001 183 aa18.38■□□□□ 0.53
LIME1-206ENST00000487026 NDUFA4L2Q9NRX3 87 aa18.38■□□□□ 0.53
LIME1-206ENST00000487026 COMMD3Q9UBI1 195 aa18.38■□□□□ 0.53
LIME1-206ENST00000487026 OR51B2Q9Y5P1 312 aa18.38■□□□□ 0.53
LIME1-206ENST00000487026 OR2T8A6NH00 312 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 GPR31O00270 319 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 TGOLN2O43493 480 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 FGF2P09038 288 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 C8orf88P0DMB2 117 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 CMTM1Q8IZ96 169 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 VN1R17PQ8TDU5 208 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 SLC25A46Q96AG3 418 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 VCX3AQ9NNX9 186 aa18.37■□□□□ 0.53
LIME1-206ENST00000487026 PHLDA2Q53GA4 152 aa18.36■□□□□ 0.53
LIME1-206ENST00000487026 RBPMS2Q6ZRY4 209 aaKnown RBP18.36■□□□□ 0.53
LIME1-206ENST00000487026 ZNF436Q9C0F3 470 aaPredicted RBP18.36■□□□□ 0.53
LIME1-206ENST00000487026 MRPL27Q9P0M9 148 aaKnown RBP18.36■□□□□ 0.53
LIME1-206ENST00000487026 UFC1Q9Y3C8 167 aa18.36■□□□□ 0.53
LIME1-206ENST00000487026 CYB5BO43169 146 aa18.35■□□□□ 0.53
LIME1-206ENST00000487026 SNAPC5O75971 98 aa18.35■□□□□ 0.53
LIME1-206ENST00000487026 NCS1P62166 190 aa18.35■□□□□ 0.53
LIME1-206ENST00000487026 THOC7Q6I9Y2 204 aaKnown RBP18.35■□□□□ 0.53
LIME1-206ENST00000487026 GPX8Q8TED1 209 aa18.35■□□□□ 0.53
LIME1-206ENST00000487026 MARC2Q969Z3 335 aa18.35■□□□□ 0.53
LIME1-206ENST00000487026 F11RQ9Y624 299 aaKnown RBP18.35■□□□□ 0.53
LIME1-206ENST00000487026 DBX1A6NMT0 343 aa18.34■□□□□ 0.53
LIME1-206ENST00000487026 ELLP55199 621 aaPredicted RBP18.34■□□□□ 0.53
LIME1-206ENST00000487026 TSPAN5P62079 268 aa18.34■□□□□ 0.53
LIME1-206ENST00000487026 ANKRD55Q3KP44 614 aa18.34■□□□□ 0.53
LIME1-206ENST00000487026 HSD17B13Q7Z5P4 300 aaPredicted RBP18.34■□□□□ 0.53
LIME1-206ENST00000487026 SNX29P2Q8IUI4 249 aa18.34■□□□□ 0.53
LIME1-206ENST00000487026 LSM10Q969L4 123 aaKnown RBP18.34■□□□□ 0.53
LIME1-206ENST00000487026 CHRDL1Q9BU40 450 aa18.34■□□□□ 0.53
LIME1-206ENST00000487026 IGHV3OR16-8A0A075B7F1 116 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 TRAV25A0A0B4J276 109 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 TNFAIP8O95379 198 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 VBP1P61758 197 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 OR1L6Q8NGR2 347 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 SCARB1Q8WTV0 552 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 TMEM190Q8WZ59 177 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 FUNDC2Q9BWH2 189 aa18.33■□□□□ 0.52
LIME1-206ENST00000487026 SMIM31A0A1B0GVY4 71 aa18.32■□□□□ 0.52
LIME1-206ENST00000487026 UBAC2Q8NBM4 344 aa18.32■□□□□ 0.52
LIME1-206ENST00000487026 BSCL2Q96G97 398 aaPredicted RBP18.32■□□□□ 0.52
LIME1-206ENST00000487026 GGTLC1Q9BX51 225 aa18.32■□□□□ 0.52
LIME1-206ENST00000487026 C21orf62Q9NYP8 219 aa18.32■□□□□ 0.52
LIME1-206ENST00000487026 LOC102724200A0A096LPH7 203 aaPredicted RBP18.31■□□□□ 0.52
LIME1-206ENST00000487026 F8W735 103 aaPredicted RBP18.31■□□□□ 0.52
LIME1-206ENST00000487026 K7EIM0 57 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 ZNF207O43670 478 aaKnown RBP18.31■□□□□ 0.52
LIME1-206ENST00000487026 APOA1P02647 267 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 ELK1P19419 428 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 TBC1D26Q86UD7 250 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 CADM3Q8N126 398 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 IL17DQ8TAD2 202 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 C20orf24Q9BUV8 137 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 C5orf66Q9H5L9 145 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 UBQLN2Q9UHD9 624 aa18.31■□□□□ 0.52
LIME1-206ENST00000487026 PRNDQ9UKY0 176 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms