RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 IGKV1-39P01597 117 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 IGKV1-5P01602 117 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 OPN1MWP04001 364 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 IGKV1D-39P04432 117 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 GIPP09681 153 aaPredicted RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 OPN1MW2P0DN77 364 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 OPN1MW3P0DN78 364 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 CNTFRP26992 372 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 VDAC2P45880 294 aaPredicted RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 COMPP49747 757 aaPredicted RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 RAP2BP61225 183 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 RAB11AP62491 216 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 RPL23AP62750 156 aaKnown RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 CD83Q01151 205 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 FCN2Q15485 313 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 LRRC37A5PQ49AS3 106 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 NMSQ5H8A3 153 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 TMEM65Q6PI78 240 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 ZNF429Q86V71 674 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 Q8N6K4 173 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 C5orf56Q8N8D9 126 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 Q8N9W7 124 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 OR1L6Q8NGR2 347 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 OR52E5Q8NH55 327 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 LHFPL5Q8TAF8 219 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 ZNF48Q96MX3 618 aaPredicted RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 NMES1Q9C002 83 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 ZNF436Q9C0F3 470 aaPredicted RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 ZNF430Q9H8G1 570 aaPredicted RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 ZNF355PQ9NSJ1 428 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 THYN1Q9P016 225 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 NSG2Q9Y328 171 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 LSM5Q9Y4Y9 91 aaKnown RBP5.54□□□□□ -1.52
UBR4-214ENST00000486515 TENM1Q9UKZ4 2725 aa5.54□□□□□ -1.52
UBR4-214ENST00000486515 FAM181BA6NEQ2 426 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 DBX1A6NMT0 343 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 SYNGR2O43760 224 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 SSSCA1O60232 199 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 SCGB2A1O75556 95 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 SIX6O95475 246 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 IGLV2-23P01705 113 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 RNASE1P07998 156 aaKnown RBP5.53□□□□□ -1.52
UBR4-214ENST00000486515 OR9G9P0C7N8 305 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 M6PRP20645 277 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 PSMB6P28072 239 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 HTR2BP41595 481 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 CAV2P51636 162 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 BRWD1-AS2P59051 145 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 UBA52P62987 128 aaKnown RBP5.53□□□□□ -1.52
UBR4-214ENST00000486515 CX3CL1P78423 397 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 RELBQ01201 579 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 TNFRSF9Q07011 255 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 ECSCRQ19T08 205 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 UNQ5815/PRO19632Q6UWF5 114 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 CENPVQ7Z7K6 275 aaPredicted RBP5.53□□□□□ -1.52
UBR4-214ENST00000486515 FAM71E2Q8N5Q1 922 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 INO80EQ8NBZ0 244 aaPredicted RBP5.53□□□□□ -1.52
UBR4-214ENST00000486515 PIFOQ8TCI5 191 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 DTD1Q8TEA8 209 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 SRSF12Q8WXF0 261 aaKnown RBP5.53□□□□□ -1.52
UBR4-214ENST00000486515 RITA1Q96K30 269 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 RAB40CQ96S21 281 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 SRSF8Q9BRL6 282 aaKnown RBP5.53□□□□□ -1.52
UBR4-214ENST00000486515 TMEM14BQ9NUH8 114 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 U3KQ87 197 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
UBR4-214ENST00000486515 TRRAPQ9Y4A5 3859 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 A0A0B4J293 547 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 TEX50A0A1B0GTY4 177 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 MSGN1A6NI15 193 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 E5RGE8 158 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 CORTO00230 105 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 IFNA4P05014 189 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 OR8U8P0C7N1 319 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 OR13C7P0DN81 318 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 HIST1H1BP16401 226 aaKnown RBP5.52□□□□□ -1.53
UBR4-214ENST00000486515 C4BPBP20851 252 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 ATP5IP56385 69 aaPredicted RBP5.52□□□□□ -1.53
UBR4-214ENST00000486515 PRCDQ00LT1 54 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 SRSF2Q01130 221 aaKnown RBP5.52□□□□□ -1.53
UBR4-214ENST00000486515 IZUMO4Q1ZYL8 232 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 C12orf54Q6X4T0 127 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 STX12Q86Y82 276 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 OR2T35Q8NGX2 323 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 OR4F5Q8NH21 305 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 PPP1R1CQ8WVI7 109 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 OR10C1Q96KK4 312 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 SLC25A31Q9H0C2 315 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 RBKSQ9H477 322 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 PLSCR3Q9NRY6 295 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 PPP1R14DQ9NXH3 145 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 PSENENQ9NZ42 101 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 HSPB7Q9UBY9 170 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 STRAPQ9Y3F4 350 aaKnown RBP5.52□□□□□ -1.53
UBR4-214ENST00000486515 YLPM1P49750 1951 aaKnown RBP5.52□□□□□ -1.53
UBR4-214ENST00000486515 DOCK11Q5JSL3 2073 aa5.52□□□□□ -1.53
UBR4-214ENST00000486515 FXYD6-FXYD2A0A087WZ82 144 aa5.51□□□□□ -1.53
UBR4-214ENST00000486515 IGHV7-81A0A0B4J1V7 117 aa5.51□□□□□ -1.53
UBR4-214ENST00000486515 TRAV3A0A0B4J244 114 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms