RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 HSD17B13Q7Z5P4 300 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 HAPLN4Q86UW8 402 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 OR5B3Q8NH48 314 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 SCGB1C1Q8TD33 95 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 PMS2P5A8MQ11 134 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 IFNA10P01566 189 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 HNF1AP20823 631 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 LCN2P80188 198 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 PAX2Q02962 417 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 VMA21Q3ZAQ7 101 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 MOB3BQ86TA1 216 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 PRIMA1Q86XR5 153 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 EIF4E3Q8N5X7 224 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 OR2G3Q8NGZ4 309 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 SH3BGRL3Q9H299 93 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 PARP11Q9NR21 331 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
POLR2J3-204ENST00000486319 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 ODF3BA8MYP8 253 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 TRIM77I1YAP6 450 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 PRB3Q04118 309 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 TPTE2P1Q5T6R2 138 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 RNF5Q99942 180 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 TMEM147Q9BVK8 224 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 SIRPDQ9H106 197 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 PLEKHA3Q9HB20 300 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 PLA2G2EQ9NZK7 142 aa11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-204ENST00000486319 TEX50A0A1B0GTY4 177 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 IGLV2-23P01705 113 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 ATP5IP56385 69 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 RAB11AP62491 216 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 HCP5Q6MZN7 132 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 TMEM182Q6ZP80 229 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 Q6ZRG5 221 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 IL17RELQ6ZVW7 336 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 TEX45Q8NA69 505 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 COMMD5Q9GZQ3 224 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 WDR61Q9GZS3 305 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.74□□□□□ -0.537e-8■■■□□ 16.4
POLR2J3-204ENST00000486319 ABCA2Q9BZC7 2435 aa11.74□□□□□ -0.53
POLR2J3-204ENST00000486319 TNCP24821 2201 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 TRAV20A0A0B4J274 112 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 I3L521 148 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 PRH1P02810 166 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 SRD5A1P18405 259 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 F2RL1P55085 397 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 OR1L8Q8NGR8 309 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 MARC2Q969Z3 335 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 PSMG3Q9BT73 122 aaPredicted RBP11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 MMP26Q9NRE1 261 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 UQCC1Q9NVA1 299 aa11.73□□□□□ -0.53
POLR2J3-204ENST00000486319 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 UBE2L5PA0A1B0GUS4 154 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 RAB19A4D1S5 217 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 OOSP1A8MZH6 123 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 TOX4O94842 621 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 CAMLGP49069 296 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 RUNX1Q01196 453 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 KLRD1Q13241 179 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 VWC2Q2TAL6 325 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 MINOS1Q5TGZ0 78 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 ETV3LQ6ZN32 361 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 THNSL2Q86YJ6 484 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 HINT2Q9BX68 163 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 MINOS1-NBL1R4GNA1 71 aa11.72□□□□□ -0.53
POLR2J3-204ENST00000486319 A0A1W2PN81 502 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 INS-IGF2F8WCM5 200 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 TEX46H3BTG2 121 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 SLC25A17O43808 307 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 NPY1RP25929 384 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 CD1BP29016 333 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 CHRNA7P36544 502 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 SRP14P37108 136 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 LGALS4P56470 323 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 SERF2P84101 59 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 AKR1C8PQ5T2L2 129 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 CCDC144NLQ6NUI1 221 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 UQCC3Q6UW78 93 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 DPPA3Q6W0C5 159 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 LYPD6BQ8NI32 183 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 TAF15Q92804 592 aaKnown RBP eCLIP11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 HRH4Q9H3N8 390 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
POLR2J3-204ENST00000486319 WNK2Q9Y3S1 2297 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms