RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 COMMD5Q9GZQ3 224 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 OR51J1Q9H342 316 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 ZNF355PQ9NSJ1 428 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 FAM212BQ9NTI7 297 aaPredicted RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 BET1LQ9NYM9 111 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 CACNG5Q9UF02 275 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 FBXO7Q9Y3I1 522 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 OR51B2Q9Y5P1 312 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 MMP24Q9Y5R2 645 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 TENM1Q9UKZ4 2725 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 TRAV41A0A0B4J266 112 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 TEX50A0A1B0GTY4 177 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 A0A1W2PN81 502 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 PSMB11A5LHX3 300 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 C5orf51A6NDU8 294 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 MSGN1A6NI15 193 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 E7EUB6 86 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 AP4M1O00189 453 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 GOSR2O14653 212 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 KCNAB3O43448 404 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 PRAF2O60831 178 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 TSPAN9O75954 239 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 SIX6O95475 246 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 DUS4LO95620 317 aaKnown RBP4.43□□□□□ -1.7
COPS3-208ENST00000486032 IFNA21P01568 189 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 IFNA17P01571 189 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 IGHG2P01859 326 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 HLA-DRB1P01911 266 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 IL5P05113 134 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 SULT1A3P0DMM9 295 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 SULT1A4P0DMN0 295 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 HLA-GP17693 338 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 VDAC1P21796 283 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 CHRNA7P36544 502 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 RPL15P61313 204 aaKnown RBP4.43□□□□□ -1.7
COPS3-208ENST00000486032 DEFA5Q01523 94 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 FOXL1Q12952 345 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 TATDN3Q17R31 274 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 MRGPRG-AS1Q2M3A8 158 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 KHDC1LQ5JSQ8 128 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 C10orf99Q6UWK7 81 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 ZNF562Q6V9R5 426 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 C12orf54Q6X4T0 127 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 Q6ZRM9 215 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 C19orf35Q6ZS72 473 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 STPG2Q8N412 459 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 KLHDC1Q8N7A1 406 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 LFNGQ8NES3 379 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 LINC01006Q8NI28 216 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 MITD1Q8WV92 249 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 SRSF12Q8WXF0 261 aaKnown RBP4.43□□□□□ -1.7
COPS3-208ENST00000486032 TMEM158Q8WZ71 300 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 IL22RA2Q969J5 263 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 TMEM56Q96MV1 263 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 MS4A10Q96PG2 267 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 MARVELD1Q9BSK0 173 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 ALX4Q9H161 411 aaPredicted RBP4.43□□□□□ -1.7
COPS3-208ENST00000486032 ENY2Q9NPA8 101 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 GSKIPQ9P0R6 139 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 PRNDQ9UKY0 176 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 ALG5Q9Y673 324 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 TMEM56-RWDD3S4R434 201 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
COPS3-208ENST00000486032 COL6A5A8TX70 2615 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 hCG_2014768A0A024R1R8 64 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 A0A0B4J293 547 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 DUXBA0A1W2PPF3 345 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 A0A1W2PRX2 142 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 CLPSL1A2RUU4 121 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 CEBPZOSA8MTT3 80 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 MPTX1A8MV57 137 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 ST8SIA3O43173 380 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 NDUFA7O95182 113 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 PRH1P02810 166 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 IL6RP08887 468 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 TRAPPC2P0DI81 140 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 TRAPPC2BP0DI82 140 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 PF4V1P10720 104 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 IAPPP10997 89 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 EGR2P11161 476 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 AREGP15514 252 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 MAS1LP35410 378 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 HOXA1P49639 335 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 COMPP49747 757 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 SLC35B1P78383 322 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 SSBP2P81877 361 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 TMEM267Q0VDI3 215 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 SMCO1Q147U7 214 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 OXA1LQ15070 435 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 POU2AF1Q16633 256 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 C2orf68Q2NKX9 166 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 IAH1Q2TAA2 248 aaPredicted RBP4.42□□□□□ -1.7
COPS3-208ENST00000486032 KRTAP21-3Q3LHN1 58 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 AWAT1Q58HT5 328 aa4.42□□□□□ -1.7
COPS3-208ENST00000486032 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms