RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 WDR83OSQ9Y284 106 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.61
CLK3-204ENST00000483723 FLNBO75369 2602 aaKnown RBP11.27□□□□□ -0.61
CLK3-204ENST00000483723 UBE2L5PA0A1B0GUS4 154 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 A0A1B0GW64 132 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 A0A1W2PN81 502 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 OPN1MWP04001 364 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 OPN1MW2P0DN77 364 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 OPN1MW3P0DN78 364 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 CNTFRP26992 372 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 CHRNA7P36544 502 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 EBI3Q14213 229 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 CCDC144NLQ6NUI1 221 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 PERPQ96FX8 193 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 AJUBAQ96IF1 538 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 HINT2Q9BX68 163 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 TPSG1Q9NRR2 321 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 FBXO7Q9Y3I1 522 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 HILPDAQ9Y5L2 63 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 PRH1P02810 166 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
CLK3-204ENST00000483723 DYNAPQ8N1N2 210 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 COMMD1Q8N668 190 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 NPBQ8NG41 125 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 OR10W1Q8NGF6 305 aa11.26□□□□□ -0.61
CLK3-204ENST00000483723 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
CLK3-204ENST00000483723 IFNA4P05014 189 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 LGALS4P56470 323 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 ERHP84090 104 aaKnown RBP11.25□□□□□ -0.61
CLK3-204ENST00000483723 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 PPP1R27Q86WC6 154 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 LPAR2Q9HBW0 351 aa11.25□□□□□ -0.61
CLK3-204ENST00000483723 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 KRBOX1C9JBD0 128 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 MPDU1O75352 247 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 NDUFA3O95167 84 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 MOSP00540 346 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 SLC25A16P16260 332 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 ZP3P21754 424 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 FGF7P21781 194 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 COL8A1P27658 744 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 PVRIGQ6DKI7 326 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 SPSB3Q6PJ21 355 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 EAF1Q96JC9 268 aaPredicted RBP11.24□□□□□ -0.61
CLK3-204ENST00000483723 SCRT1Q9BWW7 348 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 RPRMQ9NS64 109 aa11.24□□□□□ -0.61
CLK3-204ENST00000483723 METTL1Q9UBP6 276 aaKnown RBP11.24□□□□□ -0.61
CLK3-204ENST00000483723 SETXQ7Z333 2677 aaKnown RBP11.24□□□□□ -0.61
CLK3-204ENST00000483723 SNCAP37840 140 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 SSX2Q16385 188 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 Q8N6K4 173 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 BPIFCQ8NFQ6 507 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 C17orf50Q8WW18 174 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 NPCDR1Q9BY65 106 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 LSM4Q9Y4Z0 139 aaKnown RBP11.23□□□□□ -0.61
CLK3-204ENST00000483723 TRAV1-1A0A0B4J248 108 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 TSPAN15O95858 294 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 IGKV1D-33P01593 117 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 IGKV1-33P01594 117 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 CD5P06127 495 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
CLK3-204ENST00000483723 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
CLK3-204ENST00000483723 KRTAP10-9P60411 292 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 SSBP2P81877 361 aaPredicted RBP11.23□□□□□ -0.61
CLK3-204ENST00000483723 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 CLEC12BQ2HXU8 276 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 ARSJQ5FYB0 599 aaPredicted RBP11.23□□□□□ -0.61
CLK3-204ENST00000483723 OR2T10Q8NGZ9 312 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 MBD3L1Q8WWY6 194 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
CLK3-204ENST00000483723 A0A096LNT2 108 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 CENPVL3A0A0U1RRI6 287 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 IGLC7A0M8Q6 106 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 BTBD17A6NE02 478 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 NBR2O15453 112 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 SOX15O60248 233 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 SRSF3P84103 164 aaKnown RBP11.22□□□□□ -0.61
CLK3-204ENST00000483723 TMEM41BQ5BJD5 291 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 ACSM6Q6P461 480 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
CLK3-204ENST00000483723 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
CLK3-204ENST00000483723 C17orf112F2Z3M2 114 aa11.21□□□□□ -0.61
CLK3-204ENST00000483723 FCN1O00602 326 aa11.21□□□□□ -0.61
CLK3-204ENST00000483723 MBP02144 154 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms