RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 DYDC1Q8WWB3 177 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 ST6GAL2Q96JF0 529 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 OPALINQ96PE5 141 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 NIPSNAP1Q9BPW8 284 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 RHOFQ9HBH0 211 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 OR2S2Q9NQN1 319 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 MLXQ9UH92 298 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 PSORS1C1Q9UIG5 152 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 TRAPPC2LQ9UL33 140 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 SAMD4AQ9UPU9 718 aaKnown RBP2.54□□□□□ -2
LRCH3-217ENST00000483442 TMEM14AQ9Y6G1 99 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 DNAH2Q9P225 4427 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
LRCH3-217ENST00000483442 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 TRAV26-1A0A087WT03 109 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 DEFB131BA0A096LNP1 70 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 RAB19A4D1S5 217 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 MPTX1A8MV57 137 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 PPP5D1E7EU14 171 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 ZNF670-ZNF695F2Z2N8 137 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 H3BUA1 57 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 AIPO00170 330 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SLC22A1O15245 554 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 DFFBO76075 338 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 HBZP02008 142 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SEMG1P04279 462 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 CT45A6P0DMU7 189 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 CT45A5P0DMU8 189 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 CT45A7P0DMV0 189 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 DBTP11182 482 aaKnown RBP2.53□□□□□ -2
LRCH3-217ENST00000483442 SLC2A5P22732 501 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 EPHA2P29317 976 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 KCNJ3P48549 501 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 RAB11AP62491 216 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 MED21Q13503 144 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 RAB11BQ15907 218 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 PIGYQ3MUY2 71 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 FAM106AQ4KMX7 169 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SMUG1Q53HV7 270 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SYT6Q5T7P8 510 aaPredicted RBP2.53□□□□□ -2
LRCH3-217ENST00000483442 ZC2HC1BQ5TFG8 222 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 Q5VSD8 79 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 TMEM236Q5W0B7 351 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 FAM159AQ6UWV7 190 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 ZNF767PQ75MW2 155 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 UTS2BQ765I0 119 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 ARPINQ7Z6K5 226 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 CROCCP2Q86T23 111 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 APRG1Q8IVJ8 170 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SLC35F2Q8IXU6 374 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SAXO1Q8IYX7 474 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 ADAD2Q8NCV1 583 aaKnown RBP2.53□□□□□ -2
LRCH3-217ENST00000483442 OR13C9Q8NGT0 318 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 OR10AC1Q8NH08 325 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 OR4K15Q8NH41 348 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 GLYATL2Q8WU03 294 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 PP6455Q8WZ26 134 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 C10orf35Q96D05 121 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 LGALS12Q96DT0 336 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 GALNT14Q96FL9 552 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 CXorf58Q96LI9 332 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 TBX5Q99593 518 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 PHB2Q99623 299 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SLC29A1Q99808 456 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 HOPXQ9BPY8 73 aaPredicted RBP2.53□□□□□ -2
LRCH3-217ENST00000483442 NDUFAF3Q9BU61 184 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 RNF126Q9BV68 326 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SCRT1Q9BWW7 348 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 HINT2Q9BX68 163 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 C11orf68Q9H3H3 251 aaKnown RBP2.53□□□□□ -2
LRCH3-217ENST00000483442 MOB1AQ9H8S9 216 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 SAR1AQ9NR31 198 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 TVP23BQ9NYZ1 205 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 S4R3C0 116 aa2.53□□□□□ -2
LRCH3-217ENST00000483442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 LOC107986453A0A1B0GWG9 222 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 SMCO3A2RU48 225 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 CCDC182A6NF36 153 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 METTL15A6NJ78 407 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 GGCTO75223 188 aaKnown RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 OR7C1O76099 320 aaPredicted RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 S1PR2O95136 353 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 CDRT1O95170 752 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 IGHV3-23P01764 117 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 SMR3BP02814 79 aaPredicted RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 PRSS1P07477 247 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 RCC1P18754 421 aaPredicted RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 PPP1CCP36873 323 aaKnown RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 PPT1P50897 306 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 VBP1P61758 197 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 B2MP61769 119 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 RHOGP84095 191 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 CDK5Q00535 292 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 PAX5Q02548 391 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 EXOSC2Q13868 293 aaKnown RBP2.52□□□□□ -2.01
LRCH3-217ENST00000483442 TMEM187Q14656 261 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 GNMTQ14749 295 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 RSU1Q15404 277 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 KISS1Q15726 138 aa2.52□□□□□ -2.01
LRCH3-217ENST00000483442 PHLDA2Q53GA4 152 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms