RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 UBE2NLQ5JXB2 153 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 CEMP1Q6PRD7 247 aaPredicted RBP10.31□□□□□ -0.76
VARS-226ENST00000483275 ZNF66Q6ZN08 573 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 OR2C3Q8N628 320 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 OR51H1Q8NH63 302 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 TMEM190Q8WZ59 177 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 S100A16Q96FQ6 103 aaKnown RBP10.31□□□□□ -0.76
VARS-226ENST00000483275 DCSTAMPQ9H295 470 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 BET1LQ9NYM9 111 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 TNFRSF9Q07011 255 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 GPR107Q5VW38 600 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 TMEM17Q86X19 198 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 BEST4Q8NFU0 473 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 OR5B3Q8NH48 314 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 SLC25A46Q96AG3 418 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 CXorf58Q96LI9 332 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 CHRDL1Q9BU40 450 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 C20orf24Q9BUV8 137 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 ZNF436Q9C0F3 470 aaPredicted RBP10.3□□□□□ -0.76
VARS-226ENST00000483275 SLC5A7Q9GZV3 580 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 TMEM140Q9NV12 185 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 UFC1Q9Y3C8 167 aa10.3□□□□□ -0.76
VARS-226ENST00000483275 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 UPK2O00526 184 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 TGOLN2O43493 480 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 PPYP01298 95 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 BMI1P35226 326 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 RORCP51449 518 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 MFAP2P55001 183 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 APOC4P55056 127 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 WT1-ASQ06250 92 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 MZT2AQ6P582 158 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 APRG1Q8IVJ8 170 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 SAMD12Q8N8I0 201 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 MARC2Q969Z3 335 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 SLC25A38Q96DW6 304 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 SPAG8Q99932 426 aaPredicted RBP10.29□□□□□ -0.76
VARS-226ENST00000483275 HINT2Q9BX68 163 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 QTRT1Q9BXR0 403 aaKnown RBP10.29□□□□□ -0.76
VARS-226ENST00000483275 MRPL27Q9P0M9 148 aaKnown RBP10.29□□□□□ -0.76
VARS-226ENST00000483275 DNAH6Q9C0G6 4158 aa10.29□□□□□ -0.76
VARS-226ENST00000483275 TRAV25A0A0B4J276 109 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 SMIM31A0A1B0GVY4 71 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 NOL3O60936 208 aaKnown RBP10.28□□□□□ -0.76
VARS-226ENST00000483275 GABARAPO95166 117 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 OR13C7P0DN81 318 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 CBX5P45973 191 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 ZNF818PQ6ZRF7 136 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 Q6ZWC4 215 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 WFDC3Q8IUB2 231 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 SLC38A6Q8IZM9 456 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 GDPD1Q8N9F7 314 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 UBAC2Q8NBM4 344 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 DMBX1Q8NFW5 382 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 OR4A5Q8NH83 315 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 AP3S1Q92572 193 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 COMMD5Q9GZQ3 224 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 C5orf66Q9H5L9 145 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 COMMD3Q9UBI1 195 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 NSG2Q9Y328 171 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 VPS13DQ5THJ4 4388 aa10.28□□□□□ -0.76
VARS-226ENST00000483275 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 TSPAN4O14817 238 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 XRCC3O43542 346 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 NQO2P16083 231 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 PTBP1P26599 531 aaKnown RBP eCLIP10.27□□□□□ -0.77
VARS-226ENST00000483275 TFPI2P48307 235 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 ALDH3B2P48448 385 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 TAS2R31P59538 309 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 TMEM69Q5SWH9 247 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 AADACL3Q5VUY0 350 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 SLC25A24Q6NUK1 477 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
VARS-226ENST00000483275 RNF183Q96D59 192 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 NAA50Q9GZZ1 169 aaKnown RBP10.27□□□□□ -0.77
VARS-226ENST00000483275 AUNIPQ9H7T9 357 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 IFT46Q9NQC8 304 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
VARS-226ENST00000483275 TP53TG1Q9Y2A0 90 aa10.27□□□□□ -0.77
VARS-226ENST00000483275 HERC2O95714 4834 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 PCLOQ9Y6V0 5065 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 F8W735 103 aaPredicted RBP10.26□□□□□ -0.77
VARS-226ENST00000483275 RLN1P04808 185 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 CTSDP07339 412 aaPredicted RBP10.26□□□□□ -0.77
VARS-226ENST00000483275 ADMP35318 185 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 ELLP55199 621 aaPredicted RBP10.26□□□□□ -0.77
VARS-226ENST00000483275 HOGA1Q86XE5 327 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 CLVS1Q8IUQ0 354 aaPredicted RBP10.26□□□□□ -0.77
VARS-226ENST00000483275 ZNF414Q96IQ9 312 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 CMTM3Q96MX0 182 aa10.26□□□□□ -0.77
VARS-226ENST00000483275 IGHV3OR16-13A0A075B7E8 117 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 IGHV3-74A0A0B4J1X5 117 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 TEX50A0A1B0GTY4 177 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 FAM25AB3EWG3 89 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 FAM25CB3EWG5 89 aa10.25□□□□□ -0.77
VARS-226ENST00000483275 FAM25GB3EWG6 89 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms