RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RAB3DO95716 219 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 CD74P04233 296 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 CSN3P07498 182 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-213ENST00000482192 PGAM2P15259 253 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 PTBP1P26599 531 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGN1-213ENST00000482192 RND3P61587 244 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 MEF2DQ14814 521 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 C11orf87Q6NUJ2 197 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 GDPD1Q8N9F7 314 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 OR10W1Q8NGF6 305 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 SMIM4Q8WVI0 70 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 LSM10Q969L4 123 aaKnown RBP9.06□□□□□ -0.96
HMGN1-213ENST00000482192 ISOC1Q96CN7 298 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 DIRAS2Q96HU8 199 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 C6orf62Q9GZU0 229 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-213ENST00000482192 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 FKBP11Q9NYL4 201 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 OR51B2Q9Y5P1 312 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 DMRT1Q9Y5R6 373 aa9.06□□□□□ -0.96
HMGN1-213ENST00000482192 C15orf61A6NNL5 157 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 CTDSPLO15194 276 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 IGHV3-23P01764 117 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 SERPINE2P07093 398 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 ARL3P36405 182 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 PPP5CP53041 499 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 PIGPP57054 158 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 WT1-ASQ06250 92 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 IL18Q14116 193 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 SCGB2B2Q4G0G5 96 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 LCN12Q6JVE5 192 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 STEAP1BQ6NZ63 245 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 H2BFWTQ7Z2G1 175 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 OR4D10Q8NGI6 311 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 TERB2Q8NHR7 220 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 SEC22AQ96IW7 307 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 HINT2Q9BX68 163 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 SLIRPQ9GZT3 109 aaKnown RBP9.05□□□□□ -0.96
HMGN1-213ENST00000482192 TMEM14BQ9NUH8 114 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 NSG2Q9Y328 171 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 S4R3C0 116 aa9.05□□□□□ -0.96
HMGN1-213ENST00000482192 MFSD2BA6NFX1 497 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 LGALS9O00182 355 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 OR2C1O95371 312 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 HLA-AP01891 365 aaKnown RBP9.04□□□□□ -0.96
HMGN1-213ENST00000482192 PI3P19957 117 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 GPHB5Q86YW7 130 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 Q8N402 240 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 OR13C8Q8NGS7 320 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 OR2K2Q8NGT1 345 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 OR4A16Q8NH70 328 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 TMEM56Q96MV1 263 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 COPZ2Q9P299 210 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 TNCP24821 2201 aa9.04□□□□□ -0.96
HMGN1-213ENST00000482192 C3orf85A0A1B0GTC6 90 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 DBX1A6NMT0 343 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 DISC1C4P0D8 188 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 ATG12O94817 140 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 IGKV1-39P01597 117 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 IGKV1D-39P04432 117 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 CLEC3BP05452 202 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 MECP2P51608 486 aaKnown RBP9.03□□□□□ -0.96
HMGN1-213ENST00000482192 OR1L6Q8NGR2 347 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 MCFD2Q8NI22 146 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 ZNF502Q8TBZ5 544 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 VN1R17PQ8TDU5 208 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 TP53RKQ96S44 253 aa9.03□□□□□ -0.96
HMGN1-213ENST00000482192 RSL24D1Q9UHA3 163 aaKnown RBP9.03□□□□□ -0.96
HMGN1-213ENST00000482192 F11RQ9Y624 299 aaKnown RBP9.03□□□□□ -0.96
HMGN1-213ENST00000482192 ZNF320A2RRD8 509 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 C2orf70A6NJV1 201 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 A8MWP6 167 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 GSTZ1O43708 216 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-213ENST00000482192 B3GALNT1O75752 331 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 CTSDP07339 412 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-213ENST00000482192 FRMD6-AS1P0C7T7 363 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 AKAIN1P0CW23 69 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 GPR183P32249 361 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 AKR1C2P52895 323 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 SURF2Q15527 256 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-213ENST00000482192 TRIM16LQ309B1 348 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 FAM106AQ4KMX7 169 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 SLC25A24Q6NUK1 477 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 FAAP20Q6NZ36 180 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 GTSCR1Q86UQ5 136 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 SGPP2Q8IWX5 399 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 MARCH1Q8TCQ1 289 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 DYNLRB2Q8TF09 96 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 ASCL2Q99929 193 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 NXF2Q9GZY0 626 aaKnown RBP9.02□□□□□ -0.97
HMGN1-213ENST00000482192 C14orf166Q9Y224 244 aaKnown RBP9.02□□□□□ -0.97
HMGN1-213ENST00000482192 CEPT1Q9Y6K0 416 aa9.02□□□□□ -0.97
HMGN1-213ENST00000482192 U3KQK5 164 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms