RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SMIM6P0DI80 62 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SULT1A3P0DMM9 295 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SULT1A4P0DMN0 295 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 CD79AP11912 226 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 MIPP30301 263 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SDC4P31431 198 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 CKS1BP61024 79 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SLC35A2P78381 396 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 EMX1Q04741 257 aaPredicted RBP2.21□□□□□ -2.06
SF3B1-210ENST00000482158 WRNQ14191 1432 aaPredicted RBP eCLIP2.21□□□□□ -2.06
SF3B1-210ENST00000482158 NPATQ14207 1427 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 PLPPR5Q32ZL2 321 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 C9orf64Q5T6V5 341 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 N4BP2L1Q5TBK1 243 aaPredicted RBP2.21□□□□□ -2.06
SF3B1-210ENST00000482158 PPIP5K1Q6PFW1 1433 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 ALKAL1Q6UXT8 129 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 NAA40Q86UY6 237 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 LRRC28Q86X40 367 aaPredicted RBP2.21□□□□□ -2.06
SF3B1-210ENST00000482158 TMEM75Q8N9X5 138 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 ZNF439Q8NDP4 499 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 OR52L1Q8NGH7 329 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 OR5J2Q8NH18 312 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 OR10D3Q8NH80 312 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 MCFD2Q8NI22 146 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 GPR119Q8TDV5 335 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 DNAJC30Q96LL9 226 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 VPS25Q9BRG1 176 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 GGACTQ9BVM4 153 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 MROQ9BYG7 248 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 FAM96AQ9H5X1 160 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 YTHDC2Q9H6S0 1430 aaKnown RBP2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SPANXA1Q9NS26 97 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 COA4Q9NYJ1 87 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 TMEM216Q9P0N5 145 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 HECW2Q9P2P5 1572 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 MRPS16Q9Y3D3 137 aaKnown RBP2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SCN10AQ9Y5Y9 1956 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 ADGRB3O60242 1522 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 EIF4G3O43432 1585 aaKnown RBP2.2□□□□□ -2.06
SF3B1-210ENST00000482158 A0A1W2PRE2 83 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 MAP1LC3B2A6NCE7 125 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 C5orf58C9J3I9 102 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 HMGB3O15347 200 aaKnown RBP2.2□□□□□ -2.06
SF3B1-210ENST00000482158 PFDN1O60925 122 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 RBP1P09455 135 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 CXCL2P19875 107 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 BLVRBP30043 206 aaPredicted RBP2.2□□□□□ -2.06
SF3B1-210ENST00000482158 CD200P41217 278 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 MAP2K4P45985 399 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 SERPINB10P48595 397 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 PSMB3P49720 205 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 TPI1P60174 286 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 HSPE1P61604 102 aaKnown RBP2.2□□□□□ -2.06
SF3B1-210ENST00000482158 SPATA31B1PQ5VZV4 182 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 LPCAT3Q6P1A2 487 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 OR51A2Q8NGJ7 313 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 OR9Q1Q8NGQ5 310 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 OR4K15Q8NH41 348 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 OR5K1Q8NHB7 308 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 CYGBQ8WWM9 190 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 DNAJC9Q8WXX5 260 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 DCUN1D1Q96GG9 259 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 CAPZA3Q96KX2 299 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 CCDC32Q9BV29 185 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 MAP1LC3BQ9GZQ8 125 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 PYCARDQ9ULZ3 195 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 ARHGAP32A7KAX9 2087 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 ICE1Q9Y2F5 2266 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 COL4A2P08572 1712 aa2.2□□□□□ -2.06
SF3B1-210ENST00000482158 PTPRJQ12913 1337 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 NCKAP5O14513 1909 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 STRCP1A6NGW2 1772 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 SLIT2O94813 1529 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TRGV4A0A0C4DH28 118 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 FAM236DA0A1B0GTK5 79 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TEX50A0A1B0GTY4 177 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 CCDC160A6NGH7 325 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 EEF1E1-BLOC1S5C9J1V9 151 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TRAPPC2LH3BP13 241 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 CYB5BO43169 146 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 C1QBP02746 253 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TTRP02766 147 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 IGHV3-30-3P0DP02 117 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 FAM236CP0DP71 79 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 GLRXP35754 106 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 H2BFSP57053 126 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TBPL1P62380 186 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 MRPL51Q4U2R6 128 aaKnown RBP2.19□□□□□ -2.06
SF3B1-210ENST00000482158 DCUN1D2Q6PH85 259 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 ZNF550Q7Z398 422 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 UMODL1-AS1Q8N2C9 162 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 OR2T4Q8NH00 348 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 OR4K13Q8NH42 304 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 C1orf54Q8WWF1 131 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TMEM203Q969S6 136 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 OR52B2Q96RD2 323 aa2.19□□□□□ -2.06
SF3B1-210ENST00000482158 TCEAL7Q9BRU2 100 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms