RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 SPIN2AQ99865 258 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 RNF5Q99942 180 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 SPIN2BQ9BPZ2 258 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 MED28Q9H204 178 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 PARP11Q9NR21 331 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 ALG5Q9Y673 324 aa12.98□□□□□ -0.33
NUP58-212ENST00000481980 LYSTQ99698 3801 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 TRAV41A0A0B4J266 112 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 ATP6V0E1O15342 81 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 PROP1O75360 226 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 RBMXL2O75526 392 aaKnown RBP12.97□□□□□ -0.33
NUP58-212ENST00000481980 RAB9AP51151 201 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
NUP58-212ENST00000481980 TMEM187Q14656 261 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 CASC10Q5T4H9 136 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 H2BFWTQ7Z2G1 175 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 SBSPONQ8IVN8 264 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 DCUN1D4Q92564 292 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 CSMD3Q7Z407 3707 aa12.97□□□□□ -0.33
NUP58-212ENST00000481980 IGHV7-81A0A0B4J1V7 117 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 C7orf66A4D0T2 115 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 MARCH11A6NNE9 402 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 OVOL1O14753 267 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 SNAPC5O75971 98 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 S1PR2O95136 353 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 SPDEFO95238 335 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 CDS2O95674 445 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 CNTFRP26992 372 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 TMEM177Q53S58 311 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 FAM219AQ8IW50 185 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 GLYATL2Q8WU03 294 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 TMED3Q9Y3Q3 217 aa12.96□□□□□ -0.33
NUP58-212ENST00000481980 FAM25EA8MYX2 175 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 NBR2O15453 112 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 KRASP01116 189 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 LINC00205P59089 165 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 SLC35G3Q8N808 338 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 LRTM2Q8N967 370 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 NPBQ8NG41 125 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 TMEM56Q96MV1 263 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 PDCD10Q9BUL8 212 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 TMEM56-RWDD3S4R434 201 aa12.95□□□□□ -0.34
NUP58-212ENST00000481980 hCG_2014768A0A024R1R8 64 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 C5orf51A6NDU8 294 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 SAP30O75446 220 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 ACTL6BO94805 426 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 IGKV1-16P04430 117 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 HOXB5P09067 269 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 G6PCP35575 357 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 ANKRD55Q3KP44 614 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 GSG1LQ6UXU4 331 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 Q6ZNX1 250 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 SSX9Q7RTT3 188 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 OR4A5Q8NH83 315 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 DLX4Q92988 240 aaPredicted RBP12.94□□□□□ -0.34
NUP58-212ENST00000481980 RHOVQ96L33 236 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 PRR13Q9NZ81 148 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 CACFD1Q9UGQ2 172 aa12.94□□□□□ -0.34
NUP58-212ENST00000481980 GOSR2O14653 212 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 NDUFA3O95167 84 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 ZNF585BQ52M93 769 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 C19orf54Q5BKX5 351 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 SELENOHQ8IZQ5 122 aaKnown RBP12.93□□□□□ -0.34
NUP58-212ENST00000481980 OR4A16Q8NH70 328 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 LSM10Q969L4 123 aaKnown RBP12.93□□□□□ -0.34
NUP58-212ENST00000481980 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 MGAT4CQ9UBM8 478 aa12.93□□□□□ -0.34
NUP58-212ENST00000481980 C13orf42A0A1B0GVH6 325 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 LINC01619G3V211 115 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 SOX15O60248 233 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 OR2A4O95047 310 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 SLURP1P55000 103 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 UBE2KP61086 200 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 OR2A7Q96R45 310 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 TPSG1Q9NRR2 321 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 METTL1Q9UBP6 276 aaKnown RBP12.92□□□□□ -0.34
NUP58-212ENST00000481980 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
NUP58-212ENST00000481980 FBXO7Q9Y3I1 522 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 DNAH1Q9P2D7 4330 aa12.92□□□□□ -0.34
NUP58-212ENST00000481980 SLC25A17O43808 307 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 SAA1P0DJI8 122 aaPredicted RBP12.91□□□□□ -0.34
NUP58-212ENST00000481980 SULT1A3P0DMM9 295 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 SULT1A4P0DMN0 295 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 LYL1P12980 280 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 GP9P14770 177 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
NUP58-212ENST00000481980 RRAS2P62070 204 aaPredicted RBP12.91□□□□□ -0.34
NUP58-212ENST00000481980 NDPQ00604 133 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 ECSCRQ19T08 205 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 ACSM6Q6P461 480 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 LYZL2Q7Z4W2 148 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 TEX45Q8NA69 505 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 OR1S1Q8NH92 325 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 ZMAT4Q9H898 229 aa12.91□□□□□ -0.34
NUP58-212ENST00000481980 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms