RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 IFNA6P05013 189 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 TRAPPC2P0DI81 140 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 TRAPPC2BP0DI82 140 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 TSPAN5P62079 268 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 PHLDA2Q53GA4 152 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 ZNF57Q68EA5 555 aaPredicted RBP16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 SNX29P2Q8IUI4 249 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 ZNF502Q8TBZ5 544 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 DGCR14Q96DF8 476 aaKnown RBP16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 EDA2RQ9HAV5 297 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 NSG2Q9Y328 171 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 RYR3Q15413 4870 aa16.74■□□□□ 0.27
GPCPD1-206ENST00000481690 IGHV3-35A0A0C4DH35 117 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 TEX50A0A1B0GTY4 177 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 A8MWP6 167 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 CYB5BO43169 146 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 FGF2P09038 288 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 OR13C7P0DN81 318 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 G6PCP35575 357 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 THOC7Q6I9Y2 204 aaKnown RBP16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 LYSMD2Q8IV50 215 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 GDPD1Q8N9F7 314 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 UXS1Q8NBZ7 420 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 OR1L8Q8NGR8 309 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 SRD5A3Q9H8P0 318 aa16.73■□□□□ 0.27
GPCPD1-206ENST00000481690 OR11H12B2RN74 326 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 SNAPC5O75971 98 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 APOA1P02647 267 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 WT1-ASQ06250 92 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 SLC25A24Q6NUK1 477 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 PLET1Q6UQ28 207 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 BTNL8Q6UX41 500 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 UNQ9165/PRO28630Q6UXU0 137 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 TMEM61Q8N0U2 210 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 GPX8Q8TED1 209 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 MLXQ9UH92 298 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 OR51B2Q9Y5P1 312 aa16.72■□□□□ 0.27
GPCPD1-206ENST00000481690 SERPINE2P07093 398 aa16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 PTBP1P26599 531 aaKnown RBP eCLIP16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 ZNF585BQ52M93 769 aa16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 TM4SF20Q53R12 229 aa16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 SLC16A13Q7RTY0 426 aa16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 HSD17B13Q7Z5P4 300 aaPredicted RBP16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 LSM10Q969L4 123 aaKnown RBP16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 FAM110AQ9BQ89 295 aa16.71■□□□□ 0.27
GPCPD1-206ENST00000481690 HPGDSO60760 199 aa16.7■□□□□ 0.26
GPCPD1-206ENST00000481690 SCAF4O95104 1147 aaKnown RBP16.7■□□□□ 0.26
GPCPD1-206ENST00000481690 S100GP29377 79 aa16.7■□□□□ 0.26
GPCPD1-206ENST00000481690 LINC00322Q6ZN03 302 aaPredicted RBP16.7■□□□□ 0.26
GPCPD1-206ENST00000481690 CMTM3Q96MX0 182 aa16.7■□□□□ 0.26
GPCPD1-206ENST00000481690 SCPEP1Q9HB40 452 aa16.7■□□□□ 0.26
GPCPD1-206ENST00000481690 IGHV3-21A0A0B4J1V1 117 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 RBMY1BA6NDE4 496 aaKnown RBP16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 RBMY1EA6NEQ0 496 aaKnown RBP16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 OR2T8A6NH00 312 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 RBMY1DP0C7P1 496 aaKnown RBP16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 ELK1P19419 428 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 RCVRNP35243 200 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 RNASE12Q5GAN4 147 aaKnown RBP16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 LPCAT3Q6P1A2 487 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 OR52B4Q8NGK2 314 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 VN1R17PQ8TDU5 208 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 HIPK2Q9H2X6 1198 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 NDUFA4L2Q9NRX3 87 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 PRNDQ9UKY0 176 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 UFC1Q9Y3C8 167 aa16.69■□□□□ 0.26
GPCPD1-206ENST00000481690 FAM25AB3EWG3 89 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 FAM25CB3EWG5 89 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 FAM25GB3EWG6 89 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 TGOLN2O43493 480 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 RORCP51449 518 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 TBC1D26Q86UD7 250 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 MARC2Q969Z3 335 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 BOLA1Q9Y3E2 137 aa16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 F11RQ9Y624 299 aaKnown RBP16.68■□□□□ 0.26
GPCPD1-206ENST00000481690 DNAH7Q8WXX0 4024 aa16.67■□□□□ 0.26
GPCPD1-206ENST00000481690 MFAP2P55001 183 aa16.67■□□□□ 0.26
GPCPD1-206ENST00000481690 TMEM56Q96MV1 263 aa16.67■□□□□ 0.26
GPCPD1-206ENST00000481690 TSC22D3Q99576 134 aa16.67■□□□□ 0.26
GPCPD1-206ENST00000481690 GAR1Q9NY12 217 aaKnown RBP16.67■□□□□ 0.26
GPCPD1-206ENST00000481690 M0QYG6 137 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 MZT2AQ6P582 158 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 RBPMS2Q6ZRY4 209 aaKnown RBP16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 SLC38A6Q8IZM9 456 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 UBAC2Q8NBM4 344 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 OR5B3Q8NH48 314 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 ZNF436Q9C0F3 470 aaPredicted RBP16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 FKBP11Q9NYL4 201 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 C21orf62Q9NYP8 219 aa16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 MRPL27Q9P0M9 148 aaKnown RBP16.66■□□□□ 0.26
GPCPD1-206ENST00000481690 DBX1A6NMT0 343 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 C15orf61A6NNL5 157 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 ELLP55199 621 aaPredicted RBP16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 ANKRD55Q3KP44 614 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 Q56UQ5 140 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 CADM3Q8N126 398 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 SCARB1Q8WTV0 552 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 TMEM190Q8WZ59 177 aa16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 BSCL2Q96G97 398 aaPredicted RBP16.65■□□□□ 0.26
GPCPD1-206ENST00000481690 NAA50Q9GZZ1 169 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms