RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 PRSS54Q6PEW0 395 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 IL17RELQ6ZVW7 336 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 TTC9CQ8N5M4 171 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 OR2T35Q8NGX2 323 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 THAP6Q8TBB0 222 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 SRSF12Q8WXF0 261 aaKnown RBP6.54□□□□□ -1.36
SYNE1-225ENST00000481502 ARPC1AQ92747 370 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 CHIAQ9BZP6 476 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 C16orf95Q9H693 158 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 PLEKHA3Q9HB20 300 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 NSG2Q9Y328 171 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 SOX21Q9Y651 276 aaPredicted RBP6.54□□□□□ -1.36
SYNE1-225ENST00000481502 FN1P02751 2386 aaKnown RBP6.54□□□□□ -1.36
SYNE1-225ENST00000481502 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 K7EPK0 472 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 FCN1O00602 326 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 CCSO14618 274 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 CHST1O43916 411 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 NDUFA7O95182 113 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 HIST1H1BP16401 226 aaKnown RBP6.53□□□□□ -1.36
SYNE1-225ENST00000481502 PAX6P26367 422 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 VDAC2P45880 294 aaPredicted RBP6.53□□□□□ -1.36
SYNE1-225ENST00000481502 RPL23AP62750 156 aaKnown RBP6.53□□□□□ -1.36
SYNE1-225ENST00000481502 UBA52P62987 128 aaKnown RBP6.53□□□□□ -1.36
SYNE1-225ENST00000481502 RAB32Q13637 225 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 LY6EQ16553 131 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 BSXQ3C1V8 233 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 CXorf66Q5JRM2 361 aaPredicted RBP6.53□□□□□ -1.36
SYNE1-225ENST00000481502 FAM209BQ5JX69 171 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 PVRIGQ6DKI7 326 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 C11orf87Q6NUJ2 197 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 SLC35E3Q7Z769 313 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 TMEM219Q86XT9 240 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 OR2C3Q8N628 320 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 COMMD1Q8N668 190 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 OR1P1Q8NH06 330 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 DTD1Q8TEA8 209 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 WFDC12Q8WWY7 111 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 ST6GAL2Q96JF0 529 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 SLC25A31Q9H0C2 315 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 THYN1Q9P016 225 aa6.53□□□□□ -1.36
SYNE1-225ENST00000481502 MXRA5Q9NR99 2828 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 A0A1B0GVG6 124 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 CEBPZOSA8MTT3 80 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 TEX22C9J3V5 150 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 FNDC10F2Z333 226 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 L7N2F9 121 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 PFDN1O60925 122 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 SIX6O95475 246 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 C1QBP02746 253 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 CTRB1P17538 263 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 NUP62P37198 522 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-225ENST00000481502 SNCAP37840 140 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 RAB11AP62491 216 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 VAMP2P63027 116 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 SSBP2P81877 361 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-225ENST00000481502 CD83Q01151 205 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 BAXQ07812 192 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 PJVKQ0ZLH3 352 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 IZUMO4Q1ZYL8 232 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 C2orf83Q53S99 150 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 CTRB2Q6GPI1 263 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 OR2T6Q8NHC8 308 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 RNASEH2CQ8TDP1 164 aaKnown RBP6.52□□□□□ -1.37
SYNE1-225ENST00000481502 NEURL2Q9BR09 285 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 GGACTQ9BVM4 153 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 RBKSQ9H477 322 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 C11orf1Q9H5F2 150 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 HEYLQ9NQ87 328 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-225ENST00000481502 TPSG1Q9NRR2 321 aa6.52□□□□□ -1.37
SYNE1-225ENST00000481502 LYRM2Q9NU23 88 aaPredicted RBP6.52□□□□□ -1.37
SYNE1-225ENST00000481502 RCL1Q9Y2P8 373 aaKnown RBP6.52□□□□□ -1.37
SYNE1-225ENST00000481502 TRAV41A0A0B4J266 112 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 FAM181BA6NEQ2 426 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 CGB1A6NKQ9 187 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 OR13C7P0DN81 318 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 POLR2GP62487 172 aaKnown RBP eCLIP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 BLCAPP62952 87 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 SLC35B1P78383 322 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 EXOSC2Q13868 293 aaKnown RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 ZNF345Q14585 488 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 ATP6V1FQ16864 119 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 FBLN7Q53RD9 439 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 C19orf54Q5BKX5 351 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 ETFRF1Q6IPR1 90 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 TMEM14EPQ6UXP3 125 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 STPG2Q8N412 459 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 INO80EQ8NBZ0 244 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 SLC24A4Q8NFF2 622 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 FAM110DQ8TAY7 271 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 CACNG8Q8WXS5 425 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms