RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 HBG1P69891 147 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 HBG2P69892 147 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 TMEM267Q0VDI3 215 aaPredicted RBP8.08□□□□□ -1.12
USP39-215ENST00000481409 FXYD3Q14802 87 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 STX12Q86Y82 276 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 BCL6BQ8N143 479 aaPredicted RBP8.08□□□□□ -1.12
USP39-215ENST00000481409 STPG2Q8N412 459 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 ZNF114Q8NC26 417 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
USP39-215ENST00000481409 SRSF12Q8WXF0 261 aaKnown RBP8.08□□□□□ -1.12
USP39-215ENST00000481409 MFFQ9GZY8 342 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 HEYLQ9NQ87 328 aaPredicted RBP8.08□□□□□ -1.12
USP39-215ENST00000481409 PSENENQ9NZ42 101 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 STRAPQ9Y3F4 350 aaKnown RBP8.08□□□□□ -1.12
USP39-215ENST00000481409 MYO9AB2RTY4 2548 aa8.08□□□□□ -1.12
USP39-215ENST00000481409 RPL12P30050 165 aaKnown RBP8.07□□□□□ -1.12
USP39-215ENST00000481409 SNCAP37840 140 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 EIF2B2P49770 351 aaKnown RBP8.07□□□□□ -1.12
USP39-215ENST00000481409 SULT1A1P50225 295 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 PAX9P55771 341 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 CX3CL1P78423 397 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 CD300CQ08708 224 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 ATP6V1FQ16864 119 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 BSXQ3C1V8 233 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 C2orf83Q53S99 150 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 Q5BKY6 102 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 OR11H4Q8NGC9 324 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 SGMS2Q8NHU3 365 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 ARPC1AQ92747 370 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 PINX1Q96BK5 328 aaKnown RBP8.07□□□□□ -1.12
USP39-215ENST00000481409 ZNF48Q96MX3 618 aaPredicted RBP8.07□□□□□ -1.12
USP39-215ENST00000481409 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 MAGT1Q9H0U3 335 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 OR5AC2Q9NZP5 309 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 NAV3Q8IVL0 2385 aa8.07□□□□□ -1.12
USP39-215ENST00000481409 FLNAP21333 2647 aaKnown RBP8.06□□□□□ -1.12
USP39-215ENST00000481409 IGHV7-81A0A0B4J1V7 117 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 NPIPB5A8MRT5 1133 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 FNDC10F2Z333 226 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 SMLR1H3BR10 107 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 ARPC5O15511 151 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 BRI3O95415 125 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 IFNA10P01566 189 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 IGHV4-59P01825 116 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 IGHG2P01859 326 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 IGF1P05019 195 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 CRYGCP07315 174 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 HKR1P10072 659 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 PAX6P26367 422 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 S100A11P31949 105 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 CAV2P51636 162 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 AP2S1P53680 142 aaPredicted RBP8.06□□□□□ -1.12
USP39-215ENST00000481409 EIF5AP63241 154 aaKnown RBP8.06□□□□□ -1.12
USP39-215ENST00000481409 PJVKQ0ZLH3 352 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 AKIRIN2Q53H80 203 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 TMEM14EPQ6UXP3 125 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 TMEM252Q8N6L7 170 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 SLC24A4Q8NFF2 622 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 OR10P1Q8NGE3 313 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 RNASEH2CQ8TDP1 164 aaKnown RBP8.06□□□□□ -1.12
USP39-215ENST00000481409 GGACTQ9BVM4 153 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 GON7Q9BXV9 100 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
USP39-215ENST00000481409 MDFIC2A0A1B0GVS7 189 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 IGLC7A0M8Q6 106 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 TEX22C9J3V5 150 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 H3BUA1 57 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 FCN1O00602 326 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 HOXA3O43365 443 aaPredicted RBP8.05□□□□□ -1.12
USP39-215ENST00000481409 DFFBO76075 338 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 TMEM50AO95807 157 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 OR8U8P0C7N1 319 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 FAM157CP0CG43 387 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 IAPPP10997 89 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 HIST1H1BP16401 226 aaKnown RBP8.05□□□□□ -1.12
USP39-215ENST00000481409 NPY1RP25929 384 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 GNB1P62873 340 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 SSBP2P81877 361 aaPredicted RBP8.05□□□□□ -1.12
USP39-215ENST00000481409 KLK9Q2XQG4 91 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 SPANXN5Q5MJ07 72 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 PVRIGQ6DKI7 326 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 ETFRF1Q6IPR1 90 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 C9orf62Q8N4C0 152 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 TTC9CQ8N5M4 171 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 SIGLECL1Q8N7X8 197 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 OR1P1Q8NH06 330 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 C22orf15Q8WYQ4 148 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 HINT2Q9BX68 163 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 PRSS22Q9GZN4 317 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 ZC4H2Q9NQZ6 224 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 THYN1Q9P016 225 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 KLK9Q9UKQ9 250 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 NOTCH2Q04721 2471 aa8.05□□□□□ -1.12
USP39-215ENST00000481409 TET2Q6N021 2002 aaPredicted RBP8.05□□□□□ -1.12
USP39-215ENST00000481409 TEX15Q9BXT5 2789 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms