RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CD300EQ496F6 205 aaPredicted RBP8.69□□□□□ -1.02
CCM2-213ENST00000480658 ZNF57Q68EA5 555 aaPredicted RBP8.69□□□□□ -1.02
CCM2-213ENST00000480658 CLEC19AQ6UXS0 136 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 CCDC140Q96MF4 163 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 THAP7Q9BT49 309 aaPredicted RBP8.69□□□□□ -1.02
CCM2-213ENST00000480658 MRPL27Q9P0M9 148 aaKnown RBP8.69□□□□□ -1.02
CCM2-213ENST00000480658 CACFD1Q9UGQ2 172 aa8.69□□□□□ -1.02
CCM2-213ENST00000480658 ZNF320A2RRD8 509 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 C15orf61A6NNL5 157 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 FAM25AB3EWG3 89 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 FAM25CB3EWG5 89 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 FAM25GB3EWG6 89 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 RBMXL2O75526 392 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 KRASP01116 189 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 EIF4EP06730 217 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 OR13C7P0DN81 318 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 PTHLHP12272 177 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 CBLN1P23435 193 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 VBP1P61758 197 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 RELQ04864 619 aaPredicted RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 RNASE10Q5GAN6 216 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 RBPMS2Q6ZRY4 209 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 H2BFWTQ7Z2G1 175 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 HAPLN4Q86UW8 402 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 CCDC71LQ8N9Z2 235 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 OR4A16Q8NH70 328 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 ZNF502Q8TBZ5 544 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 ZFAND1Q8TCF1 268 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 FCAMRQ8WWV6 532 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 BCL7BQ9BQE9 202 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 NEURL2Q9BR09 285 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 MRPS26Q9BYN8 205 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 FXYD6Q9H0Q3 95 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 DAZ1Q9NQZ3 744 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 NDUFA4L2Q9NRX3 87 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 OR51B2Q9Y5P1 312 aa8.68□□□□□ -1.02
CCM2-213ENST00000480658 F11RQ9Y624 299 aaKnown RBP8.68□□□□□ -1.02
CCM2-213ENST00000480658 PIGBOS1A0A0B4J2F0 54 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 E7EUB6 86 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 TGOLN2O43493 480 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 NDUFB8O95169 186 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 OR2C1O95371 312 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 CLEC3BP05452 202 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 CD5P06127 495 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 LYL1P12980 280 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 GPR183P32249 361 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 BMI1P35226 326 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 TGFBR1P36897 503 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 LPAR6P43657 344 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 GPR107Q5VW38 600 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 LAMTOR1Q6IAA8 161 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 GPR141Q7Z602 305 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 ZNF114Q8NC26 417 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 OR1P1Q8NH06 330 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 GPHA2Q96T91 129 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 TXN2Q99757 166 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 PDCD10Q9BUL8 212 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 TMEM14BQ9NUH8 114 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 CEPT1Q9Y6K0 416 aa8.67□□□□□ -1.02
CCM2-213ENST00000480658 SORL1Q92673 2214 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 TEX50A0A1B0GTY4 177 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 A0A1B0GW64 132 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 TMEM213A2RRL7 107 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 CORTO00230 105 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 NDUFA4O00483 81 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 HPGDSO60760 199 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 NOL3O60936 208 aaKnown RBP8.66□□□□□ -1.02
CCM2-213ENST00000480658 REG1AP05451 166 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 FCER2P06734 321 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 ELK1P19419 428 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 G6PCP35575 357 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 TAS2R19P59542 299 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 RND3P61587 244 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 ERHP84090 104 aaKnown RBP8.66□□□□□ -1.02
CCM2-213ENST00000480658 MEF2DQ14814 521 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 SLC25A24Q6NUK1 477 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 TBC1D26Q86UD7 250 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 LYSMD2Q8IV50 215 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 OR52B4Q8NGK2 314 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 ZNF436Q9C0F3 470 aaPredicted RBP8.66□□□□□ -1.02
CCM2-213ENST00000480658 C5orf66Q9H5L9 145 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 DMRT1Q9Y5R6 373 aa8.66□□□□□ -1.02
CCM2-213ENST00000480658 MFSD2BA6NFX1 497 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 CGB1A6NKQ9 187 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 OR11H12B2RN74 326 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.02
CCM2-213ENST00000480658 FCGR2BP31994 310 aaPredicted RBP8.65□□□□□ -1.02
CCM2-213ENST00000480658 SUB1P53999 127 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCM2-213ENST00000480658 PRCDQ00LT1 54 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 CTF1Q16619 201 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 HAGHQ16775 308 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 PHLDA2Q53GA4 152 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 CASC10Q5T4H9 136 aa8.65□□□□□ -1.02
CCM2-213ENST00000480658 RAB2BQ8WUD1 216 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms