RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	NUDT15	Q9NV35	164 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	LINC00527	Q9UJ94	153 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	TMEM56-RWDD3	S4R434	201 aa		12.04	□□□□□ -0.48
HDLBP-238	ENST00000479894	PRAF2	O60831	178 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	KBTBD11	O94819	623 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	S1PR2	O95136	353 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	SFT2D2	O95562	160 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	DHFR	P00374	187 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	KRAS	P01116	189 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	ELANE	P08246	267 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	OR5AC1	P0C628	307 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	SAA1	P0DJI8	122 aa	Predicted RBP	12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	AKR1C2	P52895	323 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	IFITM3	Q01628	133 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	FOXE3	Q13461	319 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	PRSS8	Q16651	343 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	ZNF585B	Q52M93	769 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	THOC7	Q6I9Y2	204 aa	Known RBP	12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	PUSL1	Q8N0Z8	303 aa	Known RBP	12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	ADAD2	Q8NCV1	583 aa	Known RBP	12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	GLYATL2	Q8WU03	294 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	RITA1	Q96K30	269 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	TP53RK	Q96S44	253 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	PRND	Q9UKY0	176 aa		12.03	□□□□□ -0.48
HDLBP-238	ENST00000479894	SRRM4	A7MD48	611 aa	Known RBP	12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894		A8MZ25	164 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	HLA-A	P01891	365 aa	Known RBP	12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	CRYGB	P07316	175 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR4E1	P0C645	316 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR8U8	P0C7N1	319 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	GP9	P14770	177 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	MECP2	P51608	486 aa	Known RBP	12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	RPL8	P62917	257 aa	Known RBP	12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	RGS21	Q2M5E4	152 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR4A47	Q6IF82	309 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	NRARP	Q7Z6K4	114 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR4A16	Q8NH70	328 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	TMEM230	Q96A57	120 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	SPIN2A	Q99865	258 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	SPIN2B	Q9BPZ2	258 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	COMMD5	Q9GZQ3	224 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR51J1	Q9H342	316 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	TMEM140	Q9NV12	185 aa		12.02	□□□□□ -0.49
HDLBP-238	ENST00000479894	TRAV6	A0A075B6T7	132 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894		A0A0B4J2A0	478 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	IFNA21	P01568	189 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	IGF1	P05019	195 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	VDAC1	P21796	283 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	CNTFR	P26992	372 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	CX3CL1	P78423	397 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	TMEM187	Q14656	261 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	SP6	Q3SY56	376 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	TMEM268	Q5VZI3	342 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	LYG2	Q86SG7	212 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	LRTM2	Q8N967	370 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR11H1	Q8NG94	326 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	ABHD5	Q8WTS1	349 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	LSM10	Q969L4	123 aa	Known RBP	12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	SEC22A	Q96IW7	307 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	PHB2	Q99623	299 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	SPATA25	Q9BR10	227 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	SHPK	Q9UHJ6	478 aa		12.01	□□□□□ -0.49
HDLBP-238	ENST00000479894	C9orf170	A2RU37	121 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	INMT-MINDY4	F8WBC2	141 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	UPK2	O00526	184 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	RBMXL2	O75526	392 aa	Known RBP	12	□□□□□ -0.49
HDLBP-238	ENST00000479894	IL5	P05113	134 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	SPN	P16150	400 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	HLA-G	P17693	338 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	G6PC	P35575	357 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	SUPT4H1	P63272	117 aa	Known RBP	12	□□□□□ -0.49
HDLBP-238	ENST00000479894	PPP1R1A	Q13522	171 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	FXYD3	Q14802	87 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	SSX9	Q7RTT3	188 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR5B3	Q8NH48	314 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	ARPC1A	Q92747	370 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	RBMXL1	Q96E39	390 aa	Known RBP	12	□□□□□ -0.49
HDLBP-238	ENST00000479894	CLCC1	Q96S66	551 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	SRSF8	Q9BRL6	282 aa	Known RBP	12	□□□□□ -0.49
HDLBP-238	ENST00000479894	MARVELD1	Q9BSK0	173 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	PDCD10	Q9BUL8	212 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	ZNF430	Q9H8G1	570 aa	Predicted RBP	12	□□□□□ -0.49
HDLBP-238	ENST00000479894	FLVCR2	Q9UPI3	526 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	TMED3	Q9Y3Q3	217 aa		12	□□□□□ -0.49
HDLBP-238	ENST00000479894	CA2	P00918	260 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	IL6R	P08887	468 aa	Predicted RBP	11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	ANXA7	P20073	488 aa	Known RBP	11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	GNB1	P62873	340 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	DHRS2	Q13268	280 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	TNXA	Q16473	311 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	SELENOH	Q8IZQ5	122 aa	Known RBP	11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	VKORC1L1	Q8N0U8	176 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	MINDY2	Q8NBR6	621 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	CASTOR1	Q8WTX7	329 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	C19orf73	Q9NVV2	129 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	ZNF257	Q9Y2Q1	563 aa		11.99	□□□□□ -0.49
HDLBP-238	ENST00000479894	IGHV7-81	A0A0B4J1V7	117 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	SNRPGP15	A8MWD9	76 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms