RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 LIMS4P0CW20 117 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 WT1-ASQ06250 92 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 LRRTM1Q86UE6 522 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 ZFP41Q8N8Y5 198 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 RAB40CQ96S21 281 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 GABARAPL1Q9H0R8 117 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 AMBNQ9NP70 447 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 C12orf4Q9NQ89 552 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
HDAC8-217ENST00000478743 A0A1W2PPQ1 181 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 AQP12BA6NM10 295 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 FOXI3A8MTJ6 420 aaPredicted RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 IGLV2-14P01704 120 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 PRB4P10163 310 aaPredicted RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 GCSHP23434 173 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 DEFB1P60022 68 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 ERVFC1-1P60608 527 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 QRFPP83859 136 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 MRPL28Q13084 256 aaKnown RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 ATP6AP1Q15904 470 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 SLC25A24Q6NUK1 477 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 RPL22L1Q6P5R6 122 aaKnown RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 GSG1LQ6UXU4 331 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 AQP12AQ8IXF9 295 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 GDPD1Q8N9F7 314 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 OR52I1Q8NGK6 324 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 OR4A4PQ8NGN8 299 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 MRPL48Q96GC5 212 aaKnown RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 GRAMD2BQ96HH9 432 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 LPAR5Q9H1C0 372 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 RIMS4Q9H426 269 aaPredicted RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 THYN1Q9P016 225 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 CKLFQ9UBR5 152 aa8.41□□□□□ -1.06
HDAC8-217ENST00000478743 RBM7Q9Y580 266 aaKnown RBP8.41□□□□□ -1.06
HDAC8-217ENST00000478743 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 P0C879 139 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 TMEM50BP56557 158 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 TIMM50Q3ZCQ8 353 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 Q499Y3 187 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 HSP90B2PQ58FF3 399 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 SPATA24Q86W54 205 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 LINC00528Q8N1L1 170 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 SMIM19Q96E16 107 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 PGLYRP3Q96LB9 341 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.06
HDAC8-217ENST00000478743 A0A087WTM6 91 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 G3V2T6 193 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 OXTP01178 125 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
HDAC8-217ENST00000478743 PRM2P04554 102 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 FGF9P31371 208 aaPredicted RBP8.39□□□□□ -1.07
HDAC8-217ENST00000478743 SERPINB10P48595 397 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 EIF4EBP1Q13541 118 aaPredicted RBP8.39□□□□□ -1.07
HDAC8-217ENST00000478743 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 CDH26Q8IXH8 852 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 ARHGAP24Q8N264 748 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 DUSP18Q8NEJ0 188 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 OR10J5Q8NHC4 309 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 ARHGAP5-AS1Q96IT6 56 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 CMSS1Q9BQ75 279 aaKnown RBP8.39□□□□□ -1.07
HDAC8-217ENST00000478743 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
HDAC8-217ENST00000478743 TCRBV3S1A0A5B6 114 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 SMIM9A6NGZ8 99 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 TMEM14DPA8MWL7 114 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 F5H768 121 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 H3BMM0 161 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 OGG1O15527 345 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 EIF4EP06730 217 aaKnown RBP8.38□□□□□ -1.07
HDAC8-217ENST00000478743 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 ETV1P50549 477 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 RELQ04864 619 aaPredicted RBP8.38□□□□□ -1.07
HDAC8-217ENST00000478743 PLAC9Q5JTB6 97 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 ZNF773Q6PK81 442 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 H1FOOQ8IZA3 346 aaPredicted RBP8.38□□□□□ -1.07
HDAC8-217ENST00000478743 OR4S2Q8NH73 311 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 DERL3Q96Q80 235 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 UQCC2Q9BRT2 126 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 C1QTNF4Q9BXJ3 329 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 PECRQ9BY49 303 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 NXF2Q9GZY0 626 aaKnown RBP8.38□□□□□ -1.07
HDAC8-217ENST00000478743 FAM107BQ9H098 131 aa8.38□□□□□ -1.07
HDAC8-217ENST00000478743 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
HDAC8-217ENST00000478743 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
HDAC8-217ENST00000478743 IGKV1D-8A0A087WSZ0 117 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 IGKV1D-13A0A0B4J2D9 117 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 IGKV3-20P01619 116 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 SERPINE2P07093 398 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 IGKV1-13P0DP09 117 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 GABRB1P18505 474 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 CLINT1Q14677 625 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 CCDC58Q4VC31 144 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 YIF1BQ5BJH7 314 aa8.37□□□□□ -1.07
HDAC8-217ENST00000478743 C1orf158Q8N1D5 194 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms