RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 VCXQ9H320 206 aa4.91□□□□□ -1.62
RTFDC1-206ENST00000477485 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
RTFDC1-206ENST00000477485 CCL28Q9NRJ3 127 aa4.91□□□□□ -1.62
RTFDC1-206ENST00000477485 TRAV3A0A0B4J244 114 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 IGLC7A0M8Q6 106 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM235A6NFC5 223 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 IFITM5A6NNB3 132 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 M0R2N4 97 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 DNASE2O00115 360 aaPredicted RBP4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 NDUFA4O00483 81 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 CASQ2O14958 399 aaPredicted RBP4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 MRPS14O60783 128 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 IGLV2-14P01704 120 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 FCER2P06734 321 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 CD37P11049 281 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 NQO2P16083 231 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 RAB3BP20337 219 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 RAB6AP20340 208 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 CMC4P56277 68 aaPredicted RBP4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 TCTAP57738 103 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 FXYD4P59646 89 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 ERVK-16P61578 105 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 CATR1Q13166 79 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 ARL6IP1Q15041 203 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 LEMD1Q68G75 181 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 CNIH2Q6PI25 160 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF66Q6ZN08 573 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 Q6ZS49 121 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 GDPD1Q8N9F7 314 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM116Q8NCL8 245 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 OR13F1Q8NGS4 319 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 OR51H1Q8NH63 302 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 VN1R17PQ8TDU5 208 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 GIMAP1Q8WWP7 306 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 BSCL2Q96G97 398 aaPredicted RBP4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 RNF2Q99496 336 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 CHRDL1Q9BU40 450 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 RHPN1-AS1Q9BWJ2 59 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 QTRT1Q9BXR0 403 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM140Q9NV12 185 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 BET1LQ9NYM9 111 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 C21orf62Q9NYP8 219 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 ANXA10Q9UJ72 324 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 APLNQ9ULZ1 77 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 TPRKBQ9Y3C4 175 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 AGRNO00468 2067 aa4.9□□□□□ -1.63
RTFDC1-206ENST00000477485 IGHV4-4A0A075B6R2 117 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 PRSS29PA6NIE9 313 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 C11orf94C9JXX5 98 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 UPK2O00526 184 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 LCE2BO14633 110 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 NUPL2O15504 423 aaKnown RBP4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 RGS10O43665 173 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 HPRT1P00492 218 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 TRAPPC2P0DI81 140 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 TRAPPC2BP0DI82 140 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 PTHLHP12272 177 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 HLA-DMBP28068 263 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 FCGR2CP31995 323 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 TAS2R31P59538 309 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 PAFAH1B2P68402 229 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 RELQ04864 619 aaPredicted RBP4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 MLLT11Q13015 90 aaPredicted RBP4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 SSX1Q16384 188 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 AADACL3Q5VUY0 350 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 HACD4Q5VWC8 232 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 SPSB3Q6PJ21 355 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 LINC00336Q6ZUF6 198 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 NR2C2APQ86WQ0 139 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM17Q86X19 198 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 STHQ8IWL8 128 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 GVQW1Q8N7I0 195 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 TSPAN14Q8NG11 270 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 SCARB1Q8WTV0 552 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 MISP3Q96FF7 219 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 MGLLQ99685 303 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 SLC5A7Q9GZV3 580 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 ACOT13Q9NPJ3 140 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 RABAC1Q9UI14 185 aa4.89□□□□□ -1.63
RTFDC1-206ENST00000477485 TRAV10A0A0B4J240 114 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 IGHV4-28A0A0C4DH34 117 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 IGHV3-66A0A0C4DH42 116 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 IGHV7-4-1A0A0J9YVY3 117 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 TEX50A0A1B0GTY4 177 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 K7EMT4 169 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 CHEK1O14757 476 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 ST8SIA3O43173 380 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 SNAPC5O75971 98 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 IGHV3-48P01763 117 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 SERPINE2P07093 398 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 ADMP35318 185 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 DEFB131AP59861 70 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 WT1-ASQ06250 92 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 EIF4EBP1Q13541 118 aaPredicted RBP4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 IRF3Q14653 427 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 C22orf42Q6IC83 251 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 Q6ZTC4 211 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms