RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 NINJ1Q92982 152 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 C5orf30Q96GV9 206 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 OR8B2Q96RD0 313 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 CLEC7AQ9BXN2 247 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 ST20Q9HBF5 79 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 PRSS46E5RG02 174 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 GFRA3O60609 400 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 RPS16P62249 146 aaKnown RBP12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 UBE2G1P62253 170 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 KLF5Q13887 457 aaPredicted RBP12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 ZNF146Q15072 292 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 MIC13Q5XKP0 118 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 PET117Q6UWS5 81 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 CST9LQ9H4G1 147 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 SAP30LQ9HAJ7 183 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 C1RLQ9NZP8 487 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 IL19Q9UHD0 177 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 HELTA6NFD8 242 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 ERVK11-1P61568 191 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 PLGLB1Q02325 96 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 C18orf32Q8TCD1 76 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 FAM216AQ8WUB2 273 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 MS4A5Q9H3V2 200 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
CLSTN1-205ENST00000477264 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 HSBP1O75506 76 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 FRMD6-AS1P0C7T7 363 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 NTF3P20783 257 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 RAB31Q13636 194 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 EFNB3Q15768 340 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 ZNF808Q8N4W9 903 aaPredicted RBP12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 SMIM12Q96EX1 92 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 NPVFQ9HCQ7 196 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 NCKAP5O14513 1909 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 ZNF891A8MT65 544 aaPredicted RBP12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 MRPL33O75394 65 aaKnown RBP12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 BRWD1-AS2P59051 145 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 PLP2Q04941 152 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 KIAA1644Q3SXP7 199 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 ATP1A1-AS1Q5TC04 95 aa12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 YRDCQ86U90 279 aaKnown RBP12.63□□□□□ -0.39
CLSTN1-205ENST00000477264 K7ERU9 68 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 RHBDL1O75783 438 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 NGFP01138 241 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 USF1P22415 310 aaPredicted RBP12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 CA6P23280 308 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 NPY1RP25929 384 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 SLC35E4Q6ICL7 350 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 TRGV8A0A0C4DH27 118 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 FNDC10F2Z333 226 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 IGLL1P15814 213 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 SPINK9Q5DT21 86 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 LINC00696Q6ZRV3 163 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 UBALD1Q8TB05 177 aa12.62□□□□□ -0.39
CLSTN1-205ENST00000477264 CBY3A6NI87 242 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 M0R2Z0 102 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 VDAC2P45880 294 aaPredicted RBP12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 REG1BP48304 166 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 LDLRAD2Q5SZI1 272 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 IBA57Q5T440 356 aaKnown RBP12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 SPINK14Q6IE38 97 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 C12orf54Q6X4T0 127 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 PQLC2Q6ZP29 291 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 FAM19A2Q8N3H0 131 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
CLSTN1-205ENST00000477264 C12orf77C9JDV5 145 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 NKX2-8O15522 239 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 OR1C1Q15619 314 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 TEPPQ6URK8 271 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 Q6ZVH6 145 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 ATOH7Q8N100 152 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 STPG3Q8N7X2 389 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 HEYLQ9NQ87 328 aaPredicted RBP12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 DEPPQ9NTK1 212 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 J3QW42 95 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 HLA-DRB1P01911 266 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 CCL2P13500 99 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 PRAMEF5Q5TYX0 476 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 PRAMEF6Q5VXH4 476 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 MRPL54Q6P161 138 aaKnown RBP12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 DEFB125Q8N687 156 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 OR4A16Q8NH70 328 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 PRRG4Q9BZD6 226 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 CSTL1Q9H114 145 aa12.6□□□□□ -0.39
CLSTN1-205ENST00000477264 MED13Q9UHV7 2174 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 USF3Q68DE3 2245 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 TAX1BP3O14907 124 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 OR2J3O76001 311 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 HBZP02008 142 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms