RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 FAM106AQ4KMX7 169 aa8.72□□□□□ -1.01
VARS2-208ENST00000477052 UBE2NLQ5JXB2 153 aa8.72□□□□□ -1.01
VARS2-208ENST00000477052 ZNF818PQ6ZRF7 136 aa8.72□□□□□ -1.01
VARS2-208ENST00000477052 AP3S1Q92572 193 aa8.72□□□□□ -1.01
VARS2-208ENST00000477052 CMTM3Q96MX0 182 aa8.72□□□□□ -1.01
VARS2-208ENST00000477052 UBQLN2Q9UHD9 624 aa8.72□□□□□ -1.01
VARS2-208ENST00000477052 H3BMQ9 156 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 JTBO76095 146 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 EWSR1Q01844 656 aaKnown RBP eCLIP8.71□□□□□ -1.02
VARS2-208ENST00000477052 FAM209BQ5JX69 171 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 SLC16A13Q7RTY0 426 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 SAMD12Q8N8I0 201 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 ZNF502Q8TBZ5 544 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 BORCS5Q969J3 196 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 RBM38Q9H0Z9 239 aaKnown RBP8.71□□□□□ -1.02
VARS2-208ENST00000477052 AUNIPQ9H7T9 357 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 DIABLOQ9NR28 239 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 TMEM140Q9NV12 185 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 BET1LQ9NYM9 111 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 NSG2Q9Y328 171 aa8.71□□□□□ -1.02
VARS2-208ENST00000477052 TRBV7-1A0A0A6YYK4 115 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 OR2T8A6NH00 312 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 A8MWP6 167 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 XRCC3O43542 346 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 ZNF207O43670 478 aaKnown RBP8.7□□□□□ -1.02
VARS2-208ENST00000477052 DHFRP00374 187 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 HIST1H1BP16401 226 aaKnown RBP8.7□□□□□ -1.02
VARS2-208ENST00000477052 MFAP2P55001 183 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 PMS2P11Q13670 270 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 AADACL3Q5VUY0 350 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 MZT2AQ6P582 158 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 DMBX1Q8NFW5 382 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 DYNC2LI1Q8TCX1 351 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 S100A16Q96FQ6 103 aaKnown RBP8.7□□□□□ -1.02
VARS2-208ENST00000477052 GGTLC1Q9BX51 225 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 HINT2Q9BX68 163 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 CCDC59Q9P031 241 aaKnown RBP8.7□□□□□ -1.02
VARS2-208ENST00000477052 COMMD3Q9UBI1 195 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
VARS2-208ENST00000477052 LOC102724200A0A096LPH7 203 aaPredicted RBP8.69□□□□□ -1.02
VARS2-208ENST00000477052 TEX50A0A1B0GTY4 177 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 HPRT1P00492 218 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 APOA1P02647 267 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 PMP2P02689 132 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 RLN1P04808 185 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 EIF4EP06730 217 aaKnown RBP8.69□□□□□ -1.02
VARS2-208ENST00000477052 OR13C7P0DN81 318 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 NQO2P16083 231 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 GNRHRP30968 328 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 RFX2P48378 723 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 TAS2R31P59538 309 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 WT1-ASQ06250 92 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 KLK9Q2XQG4 91 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 SLC25A24Q6NUK1 477 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 PLET1Q6UQ28 207 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
VARS2-208ENST00000477052 OR5AP2Q8NGF4 316 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 OR4A5Q8NH83 315 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 CXorf58Q96LI9 332 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 CHRDL1Q9BU40 450 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 COMMD5Q9GZQ3 224 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 EHFQ9NZC4 300 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
VARS2-208ENST00000477052 A0A0J9YWU9 116 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 RBFOX2O43251 390 aaKnown RBP eCLIP8.68□□□□□ -1.02
VARS2-208ENST00000477052 HPGDSO60760 199 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 C8orf88P0DMB2 117 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 TAS2R20P59543 309 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 HERV-K104P61576 105 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 CATR1Q13166 79 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 UBAC2Q8NBM4 344 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 ZBTB34Q8NCN2 500 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 OR1L6Q8NGR2 347 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 IL17DQ8TAD2 202 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 GIMAP1Q8WWP7 306 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
VARS2-208ENST00000477052 C20orf24Q9BUV8 137 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 QTRT1Q9BXR0 403 aaKnown RBP8.68□□□□□ -1.02
VARS2-208ENST00000477052 IFT46Q9NQC8 304 aa8.68□□□□□ -1.02
VARS2-208ENST00000477052 CXorf65A6NEN9 183 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 TGOLN2O43493 480 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 ATP6V1G1O75348 118 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 PGLYRP1O75594 196 aaPredicted RBP8.67□□□□□ -1.02
VARS2-208ENST00000477052 KRASP01116 189 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 SERPINE2P07093 398 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 TRAPPC2P0DI81 140 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 TRAPPC2BP0DI82 140 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 ELK1P19419 428 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 PTBP1P26599 531 aaKnown RBP eCLIP8.67□□□□□ -1.02
VARS2-208ENST00000477052 G6PCP35575 357 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 LPAR6P43657 344 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 MSMO1Q15800 293 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 DEFB135Q30KP9 77 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 TMEM69Q5SWH9 247 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 Q6ZNX1 250 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 GDPD1Q8N9F7 314 aa8.67□□□□□ -1.02
VARS2-208ENST00000477052 FCAMRQ8WWV6 532 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms