RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 UFD1Q92890 307 aa11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 RHPN1-AS1Q9BWJ2 59 aa11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 PKD1P98161 4303 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 IGKV3-7A0A075B6H7 116 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 TRAV10A0A0B4J240 114 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 IGHV4-28A0A0C4DH34 117 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 C15orf62A8K5M9 175 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 F8W735 103 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 M0R2N4 97 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 CHEK1O14757 476 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 CTXN2P0C2S0 81 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 DTYMKP23919 212 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 CALRP27797 417 aaKnown RBP11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 ZNF575Q86XF7 245 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 POM121L12Q8N7R1 296 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 GDPD1Q8N9F7 314 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 ZNF414Q96IQ9 312 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
APOBEC3F-203ENST00000476513 IGHV7-4-1A0A0J9YVY3 117 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 C15orf61A6NNL5 157 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 UPK2O00526 184 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 CYB5BO43169 146 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 SLC25A24Q6NUK1 477 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 GBGT1Q8N5D6 347 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 ATP6V0BQ99437 205 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 AIFM2Q9BRQ8 373 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 RNF126Q9BV68 326 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 QTRT1Q9BXR0 403 aaKnown RBP11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
APOBEC3F-203ENST00000476513 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 OR13C7P0DN81 318 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 RAB6AP20340 208 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 SPAG16Q8N0X2 631 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 UBAC2Q8NBM4 344 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 SCARB1Q8WTV0 552 aa11.92□□□□□ -0.5
APOBEC3F-203ENST00000476513 PTGES3LE9PB15 166 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 TNFSF12O43508 249 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 SERPINE2P07093 398 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 TRAM1Q15629 374 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 CNIH2Q6PI25 160 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 PACRGLQ8N7B6 248 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 HSPG2P98160 4391 aa11.91□□□□□ -0.5
APOBEC3F-203ENST00000476513 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 K7EIM0 57 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 AMBPP02760 352 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 CTSGP08311 255 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 GIG44P09565 113 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 HSMCR30P0CW71 290 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 P0DMU3 169 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 FAM231AP0DMU4 169 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 FAM231CP0DMU5 169 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 OR10A3P58181 314 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 TAS2R31P59538 309 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 FABP5Q01469 135 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 POU2AF1Q16633 256 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 LGALS9BQ3B8N2 356 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 CDNFQ49AH0 187 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 Q56UQ5 140 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 CMTM3Q96MX0 182 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 DCSTAMPQ9H295 470 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 C8orf4Q9NR00 106 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
APOBEC3F-203ENST00000476513 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 FGF2P09038 288 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 TRAPPC2P0DI81 140 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 TRAPPC2BP0DI82 140 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 MIFP14174 115 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 PSMA1P25786 263 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 DEFB131AP59861 70 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 THOC7Q6I9Y2 204 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 ATG5Q9H1Y0 275 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
APOBEC3F-203ENST00000476513 TEX50A0A1B0GTY4 177 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 IFITM5A6NNB3 132 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 SULT1C2O00338 296 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 YIF1AO95070 293 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 NQO2P16083 231 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 PAFAH1B2P68402 229 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 MSMO1Q15800 293 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 HACD4Q5VWC8 232 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 ZNF773Q6PK81 442 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 TCF24Q7RTU0 167 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 HSD17B13Q7Z5P4 300 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 CENPSQ8N2Z9 138 aa11.88□□□□□ -0.51
APOBEC3F-203ENST00000476513 NUDCD2Q8WVJ2 157 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms