RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 DLL3Q9NYJ7 618 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 OR2W1Q9Y3N9 320 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 KNTC1P50748 2209 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 CLDN1O95832 211 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 YPEL3P61236 119 aaPredicted RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 ERVK11-1P61568 191 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 NIT1Q86X76 327 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 ZDHHC16Q969W1 377 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 GMPPAQ96IJ6 420 aaPredicted RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 PSMG3Q9BT73 122 aaPredicted RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 PEF1Q9UBV8 284 aaKnown RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 DOCK7Q96N67 2140 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 SERPINE2P07093 398 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 KITLGP21583 273 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 SERF2P84101 59 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 APOBEC3DQ96AK3 386 aaPredicted RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 FAM110AQ9BQ89 295 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 CLEC7AQ9BXN2 247 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 ZNF586Q9NXT0 402 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 PSG11Q9UQ72 335 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 TET2Q6N021 2002 aaPredicted RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 DPRXA6NFQ7 191 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 GNG7O60262 68 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 RAB9AP51151 201 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 LINC00205P59089 165 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 AESQ08117 197 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 Q56UQ5 140 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 OR4A47Q6IF82 309 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 Q6ZR03 302 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 OR8I2Q8N0Y5 310 aa6.97□□□□□ -1.29
VAPB-205ENST00000476395 MCRIP2Q9BUT9 160 aaKnown RBP6.97□□□□□ -1.29
VAPB-205ENST00000476395 MUC6Q6W4X9 2439 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 MED13Q9UHV7 2174 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 CTXND1A0A1B0GTU2 59 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 MMP23AO75900 390 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 IGLL1P15814 213 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.29
VAPB-205ENST00000476395 PCBD1P61457 104 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 FXYD3Q14802 87 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 ZNF497Q6ZNH5 498 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 MEGF9Q9H1U4 602 aa6.96□□□□□ -1.29
VAPB-205ENST00000476395 KALRNO60229 2985 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 MDFIC2A0A1B0GVS7 189 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 CD300LBA8K4G0 201 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 RRHO14718 337 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 SYNGR4O95473 234 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 TIMP3P35625 211 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 FOXL1Q12952 345 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 RDH5Q92781 318 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 RAB40CQ96S21 281 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 BET1LQ9NYM9 111 aa6.96□□□□□ -1.3
VAPB-205ENST00000476395 IGLC7A0M8Q6 106 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 RAB29O14966 203 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 ZNF253O75346 499 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 CA2P00918 260 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 ARR3P36575 388 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 ACSF3Q4G176 576 aaPredicted RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 TMEM14EPQ6UXP3 125 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 STPG3Q8N7X2 389 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 OR2M7Q8NG81 312 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 OR5A2Q8NGI9 324 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 LSM10Q969L4 123 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 PINX1Q96BK5 328 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 TMUB1Q9BVT8 246 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 STRADBQ9C0K7 418 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 MBNL3Q9NUK0 354 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 ONECUT1Q9UBC0 465 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 URB1O60287 2271 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 TAX1BP3O14907 124 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 CA1P00915 261 aaPredicted RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 P04436 131 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 FOLR3P41439 243 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 EDDM3BP56851 147 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 RPL30P62888 115 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 C3AR1Q16581 482 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 COX19Q49B96 90 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 ZNF766Q5HY98 468 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 ZNF841Q6ZN19 808 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 CT55Q8WUE5 264 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 NAT8BQ9UHF3 227 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 HEATR1Q9H583 2144 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 SH2D7A6NKC9 451 aaPredicted RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 WDR1O75083 606 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 KRASP01116 189 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 ESDP10768 282 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 SRIP30626 198 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 PMCHL1Q16048 86 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 MRPL54Q6P161 138 aaKnown RBP6.95□□□□□ -1.3
VAPB-205ENST00000476395 OR10G8Q8NGN5 311 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 DMXL2Q8TDJ6 3036 aa6.95□□□□□ -1.3
VAPB-205ENST00000476395 IGHV2-26A0A0B4J1V2 119 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 KIR2DS1A0A191URI9 304 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 VENTXO95231 258 aa6.94□□□□□ -1.3
VAPB-205ENST00000476395 MT-CO3P00414 261 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms