RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 RAB29O14966 203 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 NEURL1O76050 574 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 CTAG1AP78358 180 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 UTF1Q5T230 341 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SPSB3Q6PJ21 355 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 Q6ZPA2 131 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 FAM89BQ8N5H3 189 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF525Q8N782 197 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 OR1P1Q8NH06 330 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 PPP1R35Q8TAP8 253 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 ZC2HC1AQ96GY0 325 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 C18orf12Q96KH6 178 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 TMEM147Q9BVK8 224 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 FGF23Q9GZV9 251 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SLC35D1Q9NTN3 355 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 WASHC3Q9Y3C0 194 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 ATRQ13535 2644 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 IGHV3OR16-10A0A075B7F0 116 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 F2Z2F3 143 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 EREGO14944 169 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 MT-CO2P00403 227 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SLC25A5P05141 298 aaKnown RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 OR9G9P0C7N8 305 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 PYYP10082 97 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 FGF5P12034 268 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 AGAP20933 346 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 CRYGSP22914 178 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 CNN1P51911 297 aaKnown RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 RPL23P62829 140 aaKnown RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 TNFAIP6P98066 277 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 TNXAQ16473 311 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 HEPN1Q6WQI6 88 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 MIR17HGQ75NE6 70 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SSX8Q7RTT4 187 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 MRGPRGQ86SM5 289 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 DMRTC2Q8IXT2 367 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 EIF4E3Q8N5X7 224 aaKnown RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF114Q8NC26 417 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 EDARADDQ8WWZ3 215 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 DDA1Q9BW61 102 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 WDR61Q9GZS3 305 aaKnown RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 MS4A5Q9H3V2 200 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF703Q9H7S9 590 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SIRT7Q9NRC8 400 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 TP73-AS1Q9UF72 201 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 NCBP2LA6PVI3 153 aaKnown RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 H0Y980 276 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SLC25A17O43808 307 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 COX7A2P2O60397 106 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 OR2J3O76001 311 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SRIP30626 198 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 GPX4P36969 197 aaPredicted RBP4.17□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF138P52744 262 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 FADS6Q8N9I5 356 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 TMEM116Q8NCL8 245 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 OR4D5Q8NGN0 318 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 OR2T6Q8NHC8 308 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 M1APQ8TC57 530 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 HARBI1Q96MB7 349 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 TM2D1Q9BX74 207 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SAP30LQ9HAJ7 183 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 SSUH2Q9Y2M2 353 aa4.17□□□□□ -1.74
CCDC39-204ENST00000476379 J3QR06 171 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 GZMBP10144 247 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 SPRNQ5BIV9 151 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 C10orf128Q5T292 105 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 NPCDR1Q9BY65 106 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 METTL1Q9UBP6 276 aaKnown RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF106Q9H2Y7 1883 aaKnown RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 NF1P21359 2839 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 CECR9P0C854 216 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 GZMHP20718 246 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 IGHV1-2P23083 117 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 NPY1RP25929 384 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 NUBP1P53384 320 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 SPCS3P61009 180 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 KCNMB1Q16558 191 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 TDRG1Q3Y452 100 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 SLC25A53Q5H9E4 307 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 OR9G1Q8NH87 305 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 FAM222BQ8WU58 562 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 SF3B5Q9BWJ5 86 aaKnown RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 SPRR3Q9UBC9 169 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF107Q9UII5 783 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 ANKRD17O75179 2603 aaKnown RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 TRGV10A0A0A0MS01 117 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 CTXND1A0A1B0GTU2 59 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 DUXBA0A1W2PPF3 345 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 SH2D7A6NKC9 451 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 OR5B21A6NL26 309 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 IL18BPO95998 194 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 IGKV1-39P01597 117 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 AMBPP02760 352 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 IGKV1D-39P04432 117 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 UCP1P25874 307 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 HNRNPA3P51991 378 aaKnown RBP4.16□□□□□ -1.74
CCDC39-204ENST00000476379 CLDN18P56856 261 aa4.16□□□□□ -1.74
CCDC39-204ENST00000476379 STARD4Q96DR4 205 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms