RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 C2orf68Q2NKX9 166 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 LINC01006Q8NI28 216 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 ABHD5Q8WTS1 349 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 WNT10AQ9GZT5 417 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 PLEKHA3Q9HB20 300 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 FBXO7Q9Y3I1 522 aa11.93□□□□□ -0.5
MCF2L-224ENST00000475524 TRAV41A0A0B4J266 112 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 C13orf42A0A1B0GVH6 325 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 A0A1B0GW64 132 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 IGLC7A0M8Q6 106 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 CLPSL1A2RUU4 121 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 H3BUA1 57 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 CRYGCP07315 174 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 SLC35B1P78383 322 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 CFHR3Q02985 330 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 KLK9Q2XQG4 91 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 TTC9CQ8N5M4 171 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 CHAC2Q8WUX2 184 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 CIB3Q96Q77 187 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-224ENST00000475524 KLK9Q9UKQ9 250 aa11.92□□□□□ -0.5
MCF2L-224ENST00000475524 HMX3A6NHT5 357 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 FAM25EA8MYX2 175 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 E7EUB6 86 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 SYNGR2O43760 224 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
MCF2L-224ENST00000475524 H2BFSP57053 126 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 RIPPLY3P57055 190 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
MCF2L-224ENST00000475524 FCN2Q15485 313 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 LFNGQ8NES3 379 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 OR11H7Q8NGC8 314 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 FAM110DQ8TAY7 271 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-224ENST00000475524 ENY2Q9NPA8 101 aa11.91□□□□□ -0.5
MCF2L-224ENST00000475524 CEBPZOSA8MTT3 80 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 CYB5BO43169 146 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 IGHG4P01861 327 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 GIPP09681 153 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-224ENST00000475524 MYOD1P15172 320 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 CTRB1P17538 263 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 PSMB6P28072 239 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 HOXA1P49639 335 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-224ENST00000475524 CXorf66Q5JRM2 361 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-224ENST00000475524 ASPHD1Q5U4P2 390 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 NOXA1Q86UR1 476 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 OR2C3Q8N628 320 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-224ENST00000475524 DTD1Q8TEA8 209 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 WIPF2Q8TF74 440 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-224ENST00000475524 RAB40CQ96S21 281 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 FAM103A1Q9BTL3 118 aaKnown RBP11.9□□□□□ -0.5
MCF2L-224ENST00000475524 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
MCF2L-224ENST00000475524 C2CD3Q4AC94 2353 aa11.9□□□□□ -0.51
MCF2L-224ENST00000475524 WRBO00258 174 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 FBXO24O75426 580 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 IGLV1-40P01703 118 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 OPN1MWP04001 364 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 PET100P0DJ07 73 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 OPN1MW2P0DN77 364 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 OPN1MW3P0DN78 364 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 CXCL3P19876 107 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 PROK1P58294 105 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 TAS2R30P59541 319 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 RAP2BP61225 183 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 ECSCRQ19T08 205 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 BSXQ3C1V8 233 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 TMEM95Q3KNT9 176 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 TMEM158Q8WZ71 300 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 ZNF436Q9C0F3 470 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-224ENST00000475524 RBKSQ9H477 322 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 RNF114Q9Y508 228 aa11.89□□□□□ -0.51
MCF2L-224ENST00000475524 PSMB11A5LHX3 300 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 G3V318 75 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 SIX6O95475 246 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
MCF2L-224ENST00000475524 ELANEP08246 267 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 OR13C7P0DN81 318 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 AREGP15514 252 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
MCF2L-224ENST00000475524 HTR2BP41595 481 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
MCF2L-224ENST00000475524 RPP30P78346 268 aaKnown RBP11.88□□□□□ -0.51
MCF2L-224ENST00000475524 FOXE3Q13461 319 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 KRTAP24-1Q3LI83 254 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 PVRIGQ6DKI7 326 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 TEX38Q6PEX7 206 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 OR1P1Q8NH06 330 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 NOL4LQ96MY1 436 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms