RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 LIPFP07098 398 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 AKR1D1P51857 326 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 AWAT1Q58HT5 328 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 LINC00518Q8N0U6 118 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 C20orf24Q9BUV8 137 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 UBTD1Q9HAC8 227 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 RPS10P5Q9NQ39 176 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 IFNA1P01562 189 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 SNRNP70P08621 437 aaKnown RBP12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 COX7A1P24310 79 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 PLA2G5P39877 138 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 Q8N7P7 452 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 CYB561D1Q8N8Q1 229 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 TMEM167AQ8TBQ9 72 aa12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 PUS1Q9Y606 427 aaKnown RBP eCLIP12.45□□□□□ -0.42
RPUSD3-215ENST00000475470 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 BUB1B-PAK6H3BSN5 160 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 SOX15O60248 233 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 CDKN1AP38936 164 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 OPRK1P41145 380 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 VMA21Q3ZAQ7 101 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 ZFP82Q8N141 532 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 LY6G5BQ8NDX9 201 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 BEND2Q8NDZ0 799 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 OR1L8Q8NGR8 309 aa12.44□□□□□ -0.42
RPUSD3-215ENST00000475470 IGHV3-72A0A0B4J1Y9 119 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 C7orf77A4D0Y5 90 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 C22orf46C9J442 243 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 AKR1C3P42330 323 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 ARSJQ5FYB0 599 aaPredicted RBP12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 RBMS3Q6XE24 437 aaKnown RBP12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 RAB24Q969Q5 203 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 MGST2Q99735 147 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 PATZ1Q9HBE1 687 aaKnown RBP12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 NDUFA4L2Q9NRX3 87 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 VAX2Q9UIW0 290 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 INSIG2Q9Y5U4 225 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 PKD1L2Q7Z442 2459 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 C19orf84I3L1E1 186 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 IGLV2-23P01705 113 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 ATP5IP56385 69 aaPredicted RBP12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 TEPPQ6URK8 271 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 OR10W1Q8NGF6 305 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 TNCP24821 2201 aa12.43□□□□□ -0.42
RPUSD3-215ENST00000475470 SLC25A17O43808 307 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 LGALS7P47929 136 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 CDC34P49427 236 aaPredicted RBP12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 ERHP84090 104 aaKnown RBP12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 MOB3BQ86TA1 216 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 PNKDQ8N490 385 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 SSBP3Q9BWW4 388 aaPredicted RBP12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 GGTLC1Q9BX51 225 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 SMCO4Q9NRQ5 59 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 AMMECR1Q9Y4X0 333 aaPredicted RBP12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 CRYBA1P05813 215 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 RAB31Q13636 194 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 RITA1Q96K30 269 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 ZNF430Q9H8G1 570 aaPredicted RBP12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 KCNIP2Q9NS61 270 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 LSM4Q9Y4Z0 139 aaKnown RBP12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 PXMP4Q9Y6I8 212 aa12.42□□□□□ -0.42
RPUSD3-215ENST00000475470 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 A0A1W2PPV4 95 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 H3BQ15 152 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 DEFA4P12838 97 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 RHEBQ15382 184 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 RPEQ96AT9 228 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 P2RX4Q99571 388 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 TMPRSS5Q9H3S3 457 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 HRNRQ86YZ3 2850 aaPredicted RBP12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 IGHV1-3A0A0C4DH29 117 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 A0A1W2PN81 502 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 CHRNA7P36544 502 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 ARF6P62330 175 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 MIC13Q5XKP0 118 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 OR4P4Q8NGL7 312 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 SSMEM1Q8WWF3 244 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
RPUSD3-215ENST00000475470 E7EUB6 86 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 FNDC10F2Z333 226 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 PSMB3P49720 205 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 BSXQ3C1V8 233 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 SEC14L6B5MCN3 397 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 NDUFS7O75251 213 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 YIF1AO95070 293 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 NIPSNAP3BQ9BS92 247 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 SIRT7Q9NRC8 400 aa12.4□□□□□ -0.42
RPUSD3-215ENST00000475470 INS-IGF2F8WCM5 200 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 B2MP61769 119 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 TPSG1Q9NRR2 321 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms