RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.56
ITGB1-211ENST00000475184 PSMA1P25786 263 aaKnown RBP11.58□□□□□ -0.56
ITGB1-211ENST00000475184 NR2C2APQ86WQ0 139 aa11.58□□□□□ -0.56
ITGB1-211ENST00000475184 Q8NAQ8 132 aa11.58□□□□□ -0.56
ITGB1-211ENST00000475184 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
ITGB1-211ENST00000475184 ATP6V0BQ99437 205 aa11.58□□□□□ -0.56
ITGB1-211ENST00000475184 QTRT1Q9BXR0 403 aaKnown RBP11.58□□□□□ -0.56
ITGB1-211ENST00000475184 KRTAP4-5Q9BYR2 181 aa11.58□□□□□ -0.56
ITGB1-211ENST00000475184 SMPXQ9UHP9 88 aa11.58□□□□□ -0.56
ITGB1-211ENST00000475184 IGKV3-7A0A075B6H7 116 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 IGHV4-4A0A075B6R2 117 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 TRAV3A0A0B4J244 114 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 METTL21EPA6NDL7 271 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 RTL8CO15255 209 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 HSMCR30P0CW71 290 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 C21orf62Q9NYP8 219 aa11.57□□□□□ -0.56
ITGB1-211ENST00000475184 IGHV3-21A0A0B4J1V1 117 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 TRAV10A0A0B4J240 114 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 IGHV7-4-1A0A0J9YVY3 117 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 F8W735 103 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-211ENST00000475184 UPK2O00526 184 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 CHEK1O14757 476 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 TNFSF12O43508 249 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 SERPINE2P07093 398 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 OR13C7P0DN81 318 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 OR10A3P58181 314 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 FABP5Q01469 135 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 ARL6IP1Q15041 203 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 CNIH2Q6PI25 160 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 SPAG16Q8N0X2 631 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 UBAC2Q8NBM4 344 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
ITGB1-211ENST00000475184 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 IFITM5A6NNB3 132 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
ITGB1-211ENST00000475184 FGF2P09038 288 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 TAS2R31P59538 309 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 WT1-ASQ06250 92 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 POU2AF1Q16633 256 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 CDNFQ49AH0 187 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 HACD4Q5VWC8 232 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 THOC7Q6I9Y2 204 aaKnown RBP11.55□□□□□ -0.56
ITGB1-211ENST00000475184 Q6ZTC4 211 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 GBGT1Q8N5D6 347 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 SCARB1Q8WTV0 552 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 CMTM3Q96MX0 182 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 ATG5Q9H1Y0 275 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 DCSTAMPQ9H295 470 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 HSPG2P98160 4391 aa11.55□□□□□ -0.56
ITGB1-211ENST00000475184 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 RBMY1A1P0DJD3 496 aaKnown RBP11.54□□□□□ -0.56
ITGB1-211ENST00000475184 RBMY1CP0DJD4 496 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 NQO2P16083 231 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
ITGB1-211ENST00000475184 Q56UQ5 140 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 HSD17B13Q7Z5P4 300 aaPredicted RBP11.54□□□□□ -0.56
ITGB1-211ENST00000475184 NUDCD2Q8WVJ2 157 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 SECTM1Q8WVN6 248 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 RNF126Q9BV68 326 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 TMEM140Q9NV12 185 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 ANXA10Q9UJ72 324 aa11.54□□□□□ -0.56
ITGB1-211ENST00000475184 K7EIM0 57 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 SULT1C2O00338 296 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 PDCD5O14737 125 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 HPRT1P00492 218 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 CTSGP08311 255 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 TRAPPC2P0DI81 140 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 TRAPPC2BP0DI82 140 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 RELQ04864 619 aaPredicted RBP11.53□□□□□ -0.56
ITGB1-211ENST00000475184 MLLT11Q13015 90 aaPredicted RBP11.53□□□□□ -0.56
ITGB1-211ENST00000475184 MSMO1Q15800 293 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 FAM90A2PQ658T7 463 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 CENPSQ8N2Z9 138 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 POM121L12Q8N7R1 296 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 DMBX1Q8NFW5 382 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 ZNF414Q96IQ9 312 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 ACOT13Q9NPJ3 140 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 CCL28Q9NRJ3 127 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 SCN3BQ9NY72 215 aa11.53□□□□□ -0.56
ITGB1-211ENST00000475184 F11RQ9Y624 299 aaKnown RBP11.53□□□□□ -0.56
ITGB1-211ENST00000475184 TMEM235A6NFC5 223 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 M0R2N4 97 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 YIF1AO95070 293 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 AMBPP02760 352 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 P0DMU3 169 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 FAM231AP0DMU4 169 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 FAM231CP0DMU5 169 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 PAFAH1B2P68402 229 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 CATR1Q13166 79 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 OR1L8Q8NGR8 309 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 OR13F1Q8NGS4 319 aa11.52□□□□□ -0.57
ITGB1-211ENST00000475184 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
ITGB1-211ENST00000475184 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms