RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SUPT4H1P63272 117 aaKnown RBP9.23□□□□□ -0.93
CLIP2-204ENST00000474962 PPP1R1AQ13522 171 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM65Q6PI78 240 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 NRARPQ7Z6K4 114 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 FAM219AQ8IW50 185 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
CLIP2-204ENST00000474962 CADM3Q8N126 398 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 LFNGQ8NES3 379 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 COQ8AQ8NI60 647 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 SRSF12Q8WXF0 261 aaKnown RBP9.23□□□□□ -0.93
CLIP2-204ENST00000474962 IL22RA2Q969J5 263 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM56Q96MV1 263 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 HINT2Q9BX68 163 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 PALMDQ9NP74 551 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 NSG2Q9Y328 171 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM56-RWDD3S4R434 201 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 C9orf170A2RU37 121 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 CDX1P47902 265 aaPredicted RBP9.22□□□□□ -0.93
CLIP2-204ENST00000474962 CFHR3Q02985 330 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 FOXE3Q13461 319 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 DCTN2Q13561 401 aaKnown RBP9.22□□□□□ -0.93
CLIP2-204ENST00000474962 AKIRIN2Q53H80 203 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 LYG2Q86SG7 212 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 ALX4Q9H161 411 aaPredicted RBP9.22□□□□□ -0.93
CLIP2-204ENST00000474962 ZNF355PQ9NSJ1 428 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 ZNF580Q9UK33 172 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 OR51B2Q9Y5P1 312 aa9.22□□□□□ -0.93
CLIP2-204ENST00000474962 KMT2CQ8NEZ4 4911 aaKnown RBP9.22□□□□□ -0.93
CLIP2-204ENST00000474962 A0A0B4J2A0 478 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 A0A1W2PN81 502 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 G3V318 75 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 DHFRP00374 187 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 IFNA21P01568 189 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 IGKV1-5P01602 117 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 FGF2P09038 288 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 OR9G9P0C7N8 305 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 TRAPPC2P0DI81 140 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 TRAPPC2BP0DI82 140 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 CHRNA7P36544 502 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 MECP2P51608 486 aaKnown RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 OR2B8PP59922 312 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 NDPQ00604 133 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 DHRS2Q13268 280 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 CXorf66Q5JRM2 361 aaPredicted RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 THOC7Q6I9Y2 204 aaKnown RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 C11orf87Q6NUJ2 197 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 SLC35G3Q8N808 338 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 RNF152Q8N8N0 203 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 DUSP18Q8NEJ0 188 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 OR5B3Q8NH48 314 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 LSM10Q969L4 123 aaKnown RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 MCRIP2Q9BUT9 160 aaKnown RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 KLK15Q9H2R5 256 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 GPN1Q9HCN4 374 aaPredicted RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 SHPKQ9UHJ6 478 aa9.21□□□□□ -0.94
CLIP2-204ENST00000474962 FOXA2Q9Y261 457 aaPredicted RBP9.21□□□□□ -0.94
CLIP2-204ENST00000474962 TEX50A0A1B0GTY4 177 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 DUXBA0A1W2PPF3 345 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 C15orf61A6NNL5 157 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 INMT-MINDY4F8WBC2 141 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 IFNA17P01571 189 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 IGHG4P01861 327 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 ELANEP08246 267 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 IL6RP08887 468 aaPredicted RBP9.2□□□□□ -0.94
CLIP2-204ENST00000474962 APELAP0DMC3 54 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 CRIP2P52943 208 aaPredicted RBP9.2□□□□□ -0.94
CLIP2-204ENST00000474962 KIAA0141Q14154 515 aaPredicted RBP9.2□□□□□ -0.94
CLIP2-204ENST00000474962 MRGPRG-AS1Q2M3A8 158 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 C10orf55Q5SWW7 151 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 LYZL2Q7Z4W2 148 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 HSD17B13Q7Z5P4 300 aaPredicted RBP9.2□□□□□ -0.94
CLIP2-204ENST00000474962 UXS1Q8NBZ7 420 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 OR5T1Q8NG75 326 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 OR5M8Q8NGP6 311 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 LHFPL5Q8TAF8 219 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 DPF1Q92782 380 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
CLIP2-204ENST00000474962 ENY2Q9NPA8 101 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 COA4Q9NYJ1 87 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 CACFD1Q9UGQ2 172 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 FBXO7Q9Y3I1 522 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 TMED3Q9Y3Q3 217 aa9.2□□□□□ -0.94
CLIP2-204ENST00000474962 PTTG1O95997 202 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 HOXB5P09067 269 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 SULT1A3P0DMM9 295 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 SULT1A4P0DMN0 295 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 EGR2P11161 476 aaPredicted RBP9.19□□□□□ -0.94
CLIP2-204ENST00000474962 DEFA4P12838 97 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 PSMB8P28062 276 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 PPIFP30405 207 aaKnown RBP9.19□□□□□ -0.94
CLIP2-204ENST00000474962 HSPE1P61604 102 aaKnown RBP9.19□□□□□ -0.94
CLIP2-204ENST00000474962 IZUMO4Q1ZYL8 232 aa9.19□□□□□ -0.94
CLIP2-204ENST00000474962 ANKRD55Q3KP44 614 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms