RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SLC25A2Q9BXI2 301 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 POLR1DQ9Y2S0 133 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 SOX21Q9Y651 276 aaPredicted RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 IGKV1D-37A0A075B6S9 117 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PRE2 83 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 RNF212BA8MTL3 300 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 KLRC4-KLRK1H3BQV0 150 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 NDUFB4O95168 129 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 CXorf1O96002 111 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 MSR1P21757 451 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 GCHFRP30047 84 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 EFNB3Q15768 340 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 ZNF747Q9BV97 191 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 MRPL32Q9BYC8 188 aaKnown RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 MEGF9Q9H1U4 602 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 ZNF430Q9H8G1 570 aaPredicted RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 PSENENQ9NZ42 101 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 DKK4Q9UBT3 224 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 ASH1LQ9NR48 2969 aaKnown RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 ZZEF1O43149 2961 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 A0A087WX48 190 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 ZNF503-AS2A6NEH8 195 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 CGB1A6NKQ9 187 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 PRH1P02810 166 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 OR5AL1P0C617 328 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 FCGR2AP12318 317 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 COL8A1P27658 744 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 UBE2G1P62253 170 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 SRSF2Q01130 221 aaKnown RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 RELBQ01201 579 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 LCN12Q6JVE5 192 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 LINC00322Q6ZN03 302 aaPredicted RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 Q6ZN92 141 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 DRAM1Q8N682 238 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 BLNKQ8WV28 456 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 ZNF837Q96EG3 531 aaPredicted RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 PRTFDC1Q9NRG1 225 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 PEF1Q9UBV8 284 aaKnown RBP3.32□□□□□ -1.88
USP16-205ENST00000474835 PILRBQ9UKJ0 227 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 MYO9BQ13459 2157 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 CNTRLQ7Z7A1 2325 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 KNL1Q8NG31 2342 aa3.32□□□□□ -1.88
USP16-205ENST00000474835 VPS13CQ709C8 3753 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 TRAV38-1A0A0B4J264 116 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 MANSC4A6NHS7 340 aaPredicted RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 NXPH3O95157 252 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ZNF205O95201 554 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 HBZP02008 142 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 GUSBP1Q15486 140 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 RPEL1Q2QD12 228 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 LGALS9BQ3B8N2 356 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 DEFB121Q5J5C9 76 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 GCSAMLQ5JQS6 135 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 LGALS9CQ6DKI2 356 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 MEX3BQ6ZN04 569 aaKnown RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 SYT13Q7L8C5 426 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 MOB1BQ7L9L4 216 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 FGFRL1Q8N441 504 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 GJC3Q8NFK1 279 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ITLN1Q8WWA0 313 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ZNF714Q96N38 554 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 DGAT2Q96PD7 388 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ERG28Q9UKR5 140 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 BOKQ9UMX3 212 aaPredicted RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 FOXA2Q9Y261 457 aaPredicted RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 TRBV7-3A0A075B6L6 115 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 GJE1A6NN92 205 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 C17orf105B2RV13 164 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 NCR2O95944 276 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 GP1BBP13224 206 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ZNF20P17024 532 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 HNRNPA3P51991 378 aaKnown RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 PLP1P60201 277 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 HBG1P69891 147 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 HBG2P69892 147 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 KIAA1644Q3SXP7 199 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 CD300EQ496F6 205 aaPredicted RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 VHLLQ6RSH7 139 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 LCN15Q6UWW0 184 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 C12orf54Q6X4T0 127 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ZNF695Q8IW36 515 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 TTC9CQ8N5M4 171 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 THAP8Q8NA92 274 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 NUP35Q8NFH5 326 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ZNF48Q96MX3 618 aaPredicted RBP3.31□□□□□ -1.88
USP16-205ENST00000474835 OR5B12Q96R08 314 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 TMUB1Q9BVT8 246 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 PLEKHJ1Q9NW61 149 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 SPAG17Q6Q759 2223 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 A0A1W2PR77 199 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 EPM2AB3EWF7 344 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 K7ERU9 68 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 SLC17A3O00476 420 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 NEURL1O76050 574 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 MYF5P13349 255 aa3.31□□□□□ -1.88
USP16-205ENST00000474835 PMCHP20382 165 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms