RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TMEM268Q5VZI3 342 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 UNQ5815/PRO19632Q6UWF5 114 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 H2BFWTQ7Z2G1 175 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 LYG2Q86SG7 212 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 OR5T1Q8NG75 326 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 IL22RA2Q969J5 263 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 LSM10Q969L4 123 aaKnown RBP5.43□□□□□ -1.54
LIMD1-204ENST00000474665 AIFM2Q9BRQ8 373 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 QTRT1Q9BXR0 403 aaKnown RBP5.43□□□□□ -1.54
LIMD1-204ENST00000474665 KLK9Q9UKQ9 250 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 FOXA2Q9Y261 457 aaPredicted RBP5.43□□□□□ -1.54
LIMD1-204ENST00000474665 KCNIP3Q9Y2W7 256 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 HERC2O95714 4834 aa5.43□□□□□ -1.54
LIMD1-204ENST00000474665 RYR1P21817 5038 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 A0A0B4J2A0 478 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 A0A1W2PN81 502 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 MPTX1A8MV57 137 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 ST8SIA3O43173 380 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 PITX3O75364 302 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 FBXO24O75426 580 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 ADAP1O75689 374 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 DUS4LO95620 317 aaKnown RBP5.42□□□□□ -1.54
LIMD1-204ENST00000474665 HLA-AP01891 365 aaKnown RBP5.42□□□□□ -1.54
LIMD1-204ENST00000474665 PRH1P02810 166 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 REG1AP05451 166 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 CRYGCP07315 174 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 ELANEP08246 267 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 CTRB1P17538 263 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 VDAC1P21796 283 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 CHRNA7P36544 502 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 AKR1C2P52895 323 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 HSPE1P61604 102 aaKnown RBP5.42□□□□□ -1.54
LIMD1-204ENST00000474665 RPL23AP62750 156 aaKnown RBP5.42□□□□□ -1.54
LIMD1-204ENST00000474665 DEFA5Q01523 94 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 C2orf68Q2NKX9 166 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 SPINK9Q5DT21 86 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 CTRB2Q6GPI1 263 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 MZT2BQ6NZ67 158 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 TEX38Q6PEX7 206 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 ZNF429Q86V71 674 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 ZNF695Q8IW36 515 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 LGI3Q8N145 548 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 TTC9CQ8N5M4 171 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 OR1L8Q8NGR8 309 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 FAM110DQ8TAY7 271 aaPredicted RBP5.42□□□□□ -1.54
LIMD1-204ENST00000474665 ABHD5Q8WTS1 349 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 MITD1Q8WV92 249 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 FANCD2OSQ96PS1 177 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 FYTTD1Q96QD9 318 aaKnown RBP5.42□□□□□ -1.54
LIMD1-204ENST00000474665 SPIN2AQ99865 258 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 SPIN2BQ9BPZ2 258 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 MARVELD1Q9BSK0 173 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 GNB4Q9HAV0 340 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 CACNG5Q9UF02 275 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 SHPKQ9UHJ6 478 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 PRNDQ9UKY0 176 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 OR51B2Q9Y5P1 312 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 DNAH3Q8TD57 4116 aa5.42□□□□□ -1.54
LIMD1-204ENST00000474665 TRBV9A0A0B4J1U6 114 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TCRBV4S1A1TA0A5B7 111 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 NPIPB5A8MRT5 1133 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 CREBL2O60519 120 aaPredicted RBP5.41□□□□□ -1.54
LIMD1-204ENST00000474665 SNAPC5O75971 98 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 ACTL6BO94805 426 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 BRI3O95415 125 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TSPAN15O95858 294 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 IL5P05113 134 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TRAPPC2P0DI81 140 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TRAPPC2BP0DI82 140 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 OR13C7P0DN81 318 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 PF4V1P10720 104 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 PSMB6P28072 239 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 RAB9AP51151 201 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 SRPXP78539 464 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 PRCDQ00LT1 54 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM267Q0VDI3 215 aaPredicted RBP5.41□□□□□ -1.54
LIMD1-204ENST00000474665 DCTN2Q13561 401 aaKnown RBP5.41□□□□□ -1.54
LIMD1-204ENST00000474665 C4orf46Q504U0 113 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 GGNBP1Q5YKI7 109 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 REC114Q7Z4M0 266 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 FAM219AQ8IW50 185 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 COMMD1Q8N668 190 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 ZNF491Q8N8L2 437 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 OR5B3Q8NH48 314 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 OR4A16Q8NH70 328 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 ENKURQ8TC29 256 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM170AQ8WVE7 144 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 RRNAD1Q96FB5 475 aaKnown RBP5.41□□□□□ -1.54
LIMD1-204ENST00000474665 TMEM68Q96MH6 324 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 MS4A10Q96PG2 267 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 COMMD5Q9GZQ3 224 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 PALMDQ9NP74 551 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.41□□□□□ -1.54
LIMD1-204ENST00000474665 COA4Q9NYJ1 87 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 ZNF257Q9Y2Q1 563 aa5.41□□□□□ -1.54
LIMD1-204ENST00000474665 IGLV11-55A0A075B6I3 123 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 A0A1B0GU03 582 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 DUXBA0A1W2PPF3 345 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 A0A1W2PRX2 142 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms