RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 OR11H7Q8NGC8 314 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 GRPEL2Q8TAA5 225 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 SECTM1Q8WVN6 248 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 ST6GAL2Q96JF0 529 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 TMEM68Q96MH6 324 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 NAA60Q9H7X0 242 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 RANGRFQ9HD47 186 aaPredicted RBP8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 KCNIP3Q9Y2W7 256 aa8.51□□□□□ -1.05
SEMA4D-216ENST00000474258 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 DBX1A6NMT0 343 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 SSNA1O43805 119 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 B3GALNT1O75752 331 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 CCNKO75909 580 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 IGLV2-23P01705 113 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 HLA-AP01891 365 aaKnown RBP8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 FRMD6-AS1P0C7T7 363 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 ZP3P21754 424 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 AKAP14Q86UN6 197 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 CMTM1Q8IZ96 169 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 LRTM2Q8N967 370 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 OR5T1Q8NG75 326 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 RCHY1Q96PM5 261 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 PHB2Q99623 299 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 OR2D2Q9H210 308 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 ZMAT4Q9H898 229 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 SDHAF2Q9NX18 166 aa8.5□□□□□ -1.05
SEMA4D-216ENST00000474258 TEX13DA0A0J9YY54 714 aaPredicted RBP8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 SHOXO15266 292 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 OR2A4O95047 310 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 CRYGBP07316 175 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 RRASP10301 218 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 ANXA3P12429 323 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 CXCL3P19876 107 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 VAMP1P23763 118 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 S100GP29377 79 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 TMEM187Q14656 261 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 ANKRD55Q3KP44 614 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 PHLDA2Q53GA4 152 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 ZNF645Q8N7E2 425 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 COQ8AQ8NI60 647 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 HARBI1Q96MB7 349 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 OR2A7Q96R45 310 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 RBM7Q9Y580 266 aaKnown RBP8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 HUWE1Q7Z6Z7 4374 aaKnown RBP8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 NBEAL2Q6ZNJ1 2754 aa8.49□□□□□ -1.05
SEMA4D-216ENST00000474258 TENM3Q9P273 2699 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 C3orf85A0A1B0GTC6 90 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 BRI3O95415 125 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 IGLV1-51P01701 117 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 F2RP25116 425 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 SSBP2P81877 361 aaPredicted RBP8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 PJVKQ0ZLH3 352 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 RTL8BQ17RB0 113 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 TMEM177Q53S58 311 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 ZNF66Q6ZN08 573 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 TBC1D26Q86UD7 250 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 TCTE3Q8IZS6 198 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 MUC7Q8TAX7 377 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 GLYATL2Q8WU03 294 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 ASB13Q8WXK3 278 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 ADTRPQ96IZ2 230 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 ZNF436Q9C0F3 470 aaPredicted RBP8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 FAM212BQ9NTI7 297 aaPredicted RBP8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
SEMA4D-216ENST00000474258 ANKRD34BA5PLL1 514 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 SRRM4A7MD48 611 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 H0Y980 276 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 CDS2O95674 445 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 OR5AC1P0C628 307 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 UCP1P25874 307 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 SRPXP78539 464 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 CD300CQ08708 224 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 KLF5Q13887 457 aaPredicted RBP8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 VMA21Q3ZAQ7 101 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 LGI3Q8N145 548 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 TEX45Q8NA69 505 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 IL22RA2Q969J5 263 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 C5orf30Q96GV9 206 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 USMG5Q96IX5 58 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 TP53RKQ96S44 253 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 MGAT4CQ9UBM8 478 aa8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 PEF1Q9UBV8 284 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-216ENST00000474258 PIGBOS1A0A0B4J2F0 54 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 MSGN1A6NI15 193 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 A8MZ25 164 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 GIPP09681 153 aaPredicted RBP8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 IGHV4-30-4P0DP06 118 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 DUTP33316 252 aaKnown RBP8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 H2BFSP57053 126 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 SP6Q3SY56 376 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 CASC10Q5T4H9 136 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 ZNF343Q6P1L6 599 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 HAPLN4Q86UW8 402 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 Q8N1Y9 231 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 UXS1Q8NBZ7 420 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 OR9G4Q8NGQ1 327 aa8.46□□□□□ -1.06
SEMA4D-216ENST00000474258 DDB2Q92466 427 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms