RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MFSD4AQ8N468 514 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 GBGT1Q8N5D6 347 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 TMEM116Q8NCL8 245 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 NDUFAF3Q9BU61 184 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 PSORS1C1Q9UIG5 152 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 RAB22AQ9UL26 194 aa13.73□□□□□ -0.21
SORT1-203ENST00000471996 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 TMEM272A0A1B0GTI8 110 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 F8W735 103 aaPredicted RBP13.72□□□□□ -0.21
SORT1-203ENST00000471996 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
SORT1-203ENST00000471996 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 TALDO1P37837 337 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 SOHLH1Q5JUK2 328 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 OGFRL1Q5TC84 451 aaPredicted RBP13.72□□□□□ -0.21
SORT1-203ENST00000471996 GDPD1Q8N9F7 314 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 OR10R2Q8NGX6 335 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 VCXQ9H320 206 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 HRASLSQ9HDD0 168 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 C21orf62Q9NYP8 219 aa13.72□□□□□ -0.21
SORT1-203ENST00000471996 IGLV2-18A0A075B6J9 118 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 A0A075B6Q4 140 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 IGHV3-21A0A0B4J1V1 117 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 ERICH4A6NGS2 130 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 ZNF705EA8MWA4 302 aaPredicted RBP13.71□□□□□ -0.21
SORT1-203ENST00000471996 GADD45AP24522 165 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 PAFAH1B2P68402 229 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 LIPKQ5VXJ0 399 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 LEMD1Q68G75 181 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 ZNF66Q6ZN08 573 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 AHSA2Q719I0 299 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
SORT1-203ENST00000471996 OR10W1Q8NGF6 305 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 ZNF414Q96IQ9 312 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 COMMD5Q9GZQ3 224 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 PLCXD1Q9NUJ7 323 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 TAS2R8Q9NYW2 309 aa13.71□□□□□ -0.21
SORT1-203ENST00000471996 IGHV3-49A0A0A0MS15 119 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 TRAV3A0A0B4J244 114 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 DFFBO76075 338 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 IFNA10P01566 189 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 CTXN2P0C2S0 81 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 HIST1H1DP16402 221 aaKnown RBP13.7□□□□□ -0.22
SORT1-203ENST00000471996 RANBP1P43487 201 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 DEFB131AP59861 70 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 C12orf74Q32Q52 190 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 TMEM41BQ5BJD5 291 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 SCARB1Q8WTV0 552 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 X6R8D5 127 aa13.7□□□□□ -0.22
SORT1-203ENST00000471996 DNAH5Q8TE73 4624 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 C16orf90A8MZG2 172 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 UPK2O00526 184 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 SERPINE2P07093 398 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 LAIR2Q6ISS4 152 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 Q6ZRM9 215 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 STHQ8IWL8 128 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 Q8N1X5 172 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 UBAC2Q8NBM4 344 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 OR10C1Q96KK4 312 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 GPHA2Q96T91 129 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 SCRT1Q9BWW7 348 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 QTRT1Q9BXR0 403 aaKnown RBP13.69□□□□□ -0.22
SORT1-203ENST00000471996 CELA1Q9UNI1 258 aa13.69□□□□□ -0.22
SORT1-203ENST00000471996 CD74P04233 296 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 CTSGP08311 255 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 OR13C7P0DN81 318 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 DTYMKP23919 212 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 Q56UQ5 140 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 TMEM91Q6ZNR0 172 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 ZNF767PQ75MW2 155 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 TMEM203Q969S6 136 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
SORT1-203ENST00000471996 TRAV14DV4A0A0A6YYC5 116 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 CD5P06127 495 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 FGF2P09038 288 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 RELQ04864 619 aaPredicted RBP13.67□□□□□ -0.22
SORT1-203ENST00000471996 WT1-ASQ06250 92 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 THOC7Q6I9Y2 204 aaKnown RBP13.67□□□□□ -0.22
SORT1-203ENST00000471996 TCF24Q7RTU0 167 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 HSD17B13Q7Z5P4 300 aaPredicted RBP13.67□□□□□ -0.22
SORT1-203ENST00000471996 DGCR14Q96DF8 476 aaKnown RBP13.67□□□□□ -0.22
SORT1-203ENST00000471996 FKBP14Q9NWM8 211 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 ELF5Q9UKW6 265 aaPredicted RBP13.67□□□□□ -0.22
SORT1-203ENST00000471996 V9GY05 133 aa13.67□□□□□ -0.22
SORT1-203ENST00000471996 IGHV3OR16-13A0A075B7E8 117 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 IGHV3-74A0A0B4J1X5 117 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 K7EIM0 57 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
SORT1-203ENST00000471996 ARL6IP5O75915 188 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 YIF1AO95070 293 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 IFNA21P01568 189 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 IFNA17P01571 189 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 TRAPPC2P0DI81 140 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 TRAPPC2BP0DI82 140 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 TAS2R31P59538 309 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 SPHARQ15513 63 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 POU2AF1Q16633 256 aa13.66□□□□□ -0.22
SORT1-203ENST00000471996 HES5Q5TA89 166 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms