RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 SPINK9Q5DT21 86 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 ITGB1BP1O14713 200 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 TMPRSS2O15393 492 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 CHRNA7P36544 502 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 ATG101Q9BSB4 218 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 SNHG12Q9BXW3 62 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 RAB9BQ9NP90 201 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 FKBP11Q9NYL4 201 aa14.28□□□□□ -0.12
RRP1-202ENST00000471909 RAI1Q7Z5J4 1906 aaPredicted RBP14.27□□□□□ -0.12
RRP1-202ENST00000471909 SHISA9B4DS77 424 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 MMP23AO75900 390 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 RAB7AP51149 207 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 FAM78BQ5VT40 261 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 TEX38Q6PEX7 206 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 ZNF709Q8N972 641 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 QTRT1Q9BXR0 403 aaKnown RBP14.27□□□□□ -0.13
RRP1-202ENST00000471909 SAP30LQ9HAJ7 183 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 ZZEF1O43149 2961 aa14.27□□□□□ -0.13
RRP1-202ENST00000471909 RBFOX2O43251 390 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■□□□□ 9.8
RRP1-202ENST00000471909 IL3RAP26951 378 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 UCNP55089 124 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 ERVFC1-1P60608 527 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 VKORC1L1Q8N0U8 176 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 DDB2Q92466 427 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 NEUROG1Q92886 237 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 LINC00574Q9H8X3 128 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 CBLN4Q9NTU7 201 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 SAA2-SAA4A0A096LPE2 208 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 PMS2P5A8MQ11 134 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 C11orf94C9JXX5 98 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 SAA2P0DJI9 122 aaPredicted RBP14.26□□□□□ -0.13
RRP1-202ENST00000471909 OR10P1Q8NGE3 313 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 CORO2AQ92828 525 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 S1PR3Q99500 378 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 NGBQ9NPG2 151 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 IDI2-AS1Q9NZ38 188 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 SPTA1P02549 2419 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 DSCAML1Q8TD84 2053 aa14.26□□□□□ -0.13
RRP1-202ENST00000471909 E7EQL1 145 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 M0R143 59 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 TFF3Q07654 80 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 ZNF439Q8NDP4 499 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 BTF3L4Q96K17 158 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 NPCDR1Q9BY65 106 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 TRAPPC1Q9Y5R8 145 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 A0A0U1RQK1 487 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 ZNF320A2RRD8 509 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 AARDQ4LEZ3 155 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 RNASE6Q93091 150 aaKnown RBP14.25□□□□□ -0.13
RRP1-202ENST00000471909 CIB3Q96Q77 187 aaPredicted RBP14.25□□□□□ -0.13
RRP1-202ENST00000471909 RELNP78509 3460 aa14.25□□□□□ -0.13
RRP1-202ENST00000471909 TRAV38-1A0A0B4J264 116 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 TMEM178BH3BS89 294 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 RPS16P62249 146 aaKnown RBP14.24□□□□□ -0.13
RRP1-202ENST00000471909 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 PRAMEF5Q5TYX0 476 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 CCL17Q92583 94 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 POLEQ07864 2286 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 NKX6-3A6NJ46 265 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 VSTM5A8MXK1 200 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 FCN3O75636 299 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 CD99P14209 185 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 G0S2P27469 103 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 CASP6P55212 293 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 RPL15P61313 204 aaKnown RBP14.24□□□□□ -0.13
RRP1-202ENST00000471909 LINC01551Q86U37 167 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 LYG1Q8N1E2 194 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 NAGKQ9UJ70 344 aa14.24□□□□□ -0.13
RRP1-202ENST00000471909 FAM90A9PA6NNJ1 464 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 NPPCP23582 126 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 CDC34P49427 236 aaPredicted RBP14.23□□□□□ -0.13
RRP1-202ENST00000471909 GNG10P50151 68 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.23□□□□□ -0.13
RRP1-202ENST00000471909 SPOCK3Q9BQ16 436 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 SLC25A10Q9UBX3 287 aaPredicted RBP14.23□□□□□ -0.13
RRP1-202ENST00000471909 POLR3KQ9Y2Y1 108 aaPredicted RBP14.23□□□□□ -0.13
RRP1-202ENST00000471909 DOCK11Q5JSL3 2073 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 PKDREJQ9NTG1 2253 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 KIR2DL5BA0A0G2JN68 375 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 KIR2DL5BA0A0G2JPC4 375 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 hADV38S2A0JD32 116 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 C17orf112F2Z3M2 114 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 DEFA4P12838 97 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 KIR2DS2P43631 304 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 MRPS11P82912 194 aaKnown RBP14.23□□□□□ -0.13
RRP1-202ENST00000471909 KIR2DL5AQ8N109 375 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 TMEM68Q96MH6 324 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 RPUSD1Q9UJJ7 312 aaKnown RBP14.23□□□□□ -0.13
RRP1-202ENST00000471909 LINC00312Q9Y6C7 94 aa14.23□□□□□ -0.13
RRP1-202ENST00000471909 PPIAL4EA0A075B759 164 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 TRAV3A0A0B4J244 114 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 PPIAL4DF5H284 164 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 PDE6DO43924 150 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 PPIAL4FP0DN26 164 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 OR10J1P30954 320 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 CA7P43166 264 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 ERVK-16P61578 105 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 OR4A16Q8NH70 328 aa14.22□□□□□ -0.13
RRP1-202ENST00000471909 MS4A10Q96PG2 267 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms