RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 OVOL2Q9BRP0 275 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 ZNF2Q9BSG1 426 aaPredicted RBP6.02□□□□□ -1.45
USP48-207ENST00000471752 FXYD6Q9H0Q3 95 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 BET1LQ9NYM9 111 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 PEMTQ9UBM1 199 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 UBQLN2Q9UHD9 624 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 ANAPC10Q9UM13 185 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 MRPS7Q9Y2R9 242 aaKnown RBP6.02□□□□□ -1.45
USP48-207ENST00000471752 IGHV3-49A0A0A0MS15 119 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 OR2T8A6NH00 312 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 AIREO43918 545 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 TPPPO94811 219 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 HPRT1P00492 218 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 HRASP01112 189 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 KRASP01116 189 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 DEFA4P12838 97 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 MAS1LP35410 378 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 NCS1P62166 190 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 ARL6IP1Q15041 203 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 POU2AF1Q16633 256 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 AADACL3Q5VUY0 350 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 SLC25A24Q6NUK1 477 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 LILRB2Q8N423 598 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 SAMD12Q8N8I0 201 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 FCGR1BQ92637 280 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 EEF1AKMT3Q96AZ1 226 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 HINT2Q9BX68 163 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 NAA50Q9GZZ1 169 aaKnown RBP6.01□□□□□ -1.45
USP48-207ENST00000471752 NDUFA4L2Q9NRX3 87 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 EHFQ9NZC4 300 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 ETV7Q9Y603 341 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 HECTD4Q9Y4D8 3996 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
USP48-207ENST00000471752 IGHV3OR16-13A0A075B7E8 117 aa6□□□□□ -1.45
USP48-207ENST00000471752 IGHV3-74A0A0B4J1X5 117 aa6□□□□□ -1.45
USP48-207ENST00000471752 K7EIM0 57 aa6□□□□□ -1.45
USP48-207ENST00000471752 RBFOX2O43251 390 aaKnown RBP eCLIP6□□□□□ -1.45
USP48-207ENST00000471752 SERPINE2P07093 398 aa6□□□□□ -1.45
USP48-207ENST00000471752 TRAPPC2P0DI81 140 aa6□□□□□ -1.45
USP48-207ENST00000471752 TRAPPC2BP0DI82 140 aa6□□□□□ -1.45
USP48-207ENST00000471752 NQO2P16083 231 aa6□□□□□ -1.45
USP48-207ENST00000471752 NAT1P18440 290 aa6□□□□□ -1.45
USP48-207ENST00000471752 PTBP1P26599 531 aaKnown RBP eCLIP6□□□□□ -1.45
USP48-207ENST00000471752 TAS2R31P59538 309 aa6□□□□□ -1.45
USP48-207ENST00000471752 TNFRSF9Q07011 255 aa6□□□□□ -1.45
USP48-207ENST00000471752 FAM106AQ4KMX7 169 aa6□□□□□ -1.45
USP48-207ENST00000471752 PHLDA2Q53GA4 152 aa6□□□□□ -1.45
USP48-207ENST00000471752 SPINK9Q5DT21 86 aa6□□□□□ -1.45
USP48-207ENST00000471752 RNASE12Q5GAN4 147 aaKnown RBP6□□□□□ -1.45
USP48-207ENST00000471752 ZNF57Q68EA5 555 aaPredicted RBP6□□□□□ -1.45
USP48-207ENST00000471752 SLC25A42Q86VD7 318 aa6□□□□□ -1.45
USP48-207ENST00000471752 DMBX1Q8NFW5 382 aa6□□□□□ -1.45
USP48-207ENST00000471752 OR2K2Q8NGT1 345 aa6□□□□□ -1.45
USP48-207ENST00000471752 VSTM2AQ8TAG5 236 aa6□□□□□ -1.45
USP48-207ENST00000471752 SCARB1Q8WTV0 552 aa6□□□□□ -1.45
USP48-207ENST00000471752 MOB3AQ96BX8 217 aa6□□□□□ -1.45
USP48-207ENST00000471752 DIABLOQ9NR28 239 aa6□□□□□ -1.45
USP48-207ENST00000471752 SLC2A8Q9NY64 477 aa6□□□□□ -1.45
USP48-207ENST00000471752 TECRQ9NZ01 308 aaKnown RBP6□□□□□ -1.45
USP48-207ENST00000471752 MARCH11A6NNE9 402 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 A8MWP6 167 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 M0QYG6 137 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 TGOLN2O43493 480 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 SCGNO76038 276 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 APOHP02749 345 aaPredicted RBP5.99□□□□□ -1.45
USP48-207ENST00000471752 IFNA6P05013 189 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 CTSGP08311 255 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 ELK1P19419 428 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 PI3P19957 117 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 F2RP25116 425 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 HRH1P35367 487 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 RANBP1P43487 201 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 VBP1P61758 197 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 MSMO1Q15800 293 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 ODF3L2Q3SX64 289 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 KCTD21Q4G0X4 260 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 PLET1Q6UQ28 207 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 SNX29P2Q8IUI4 249 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 GDPD1Q8N9F7 314 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 ZBTB34Q8NCN2 500 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 OR52B4Q8NGK2 314 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 OR4A5Q8NH83 315 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 GPX8Q8TED1 209 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 DGCR14Q96DF8 476 aaKnown RBP5.99□□□□□ -1.45
USP48-207ENST00000471752 S100A16Q96FQ6 103 aaKnown RBP5.99□□□□□ -1.45
USP48-207ENST00000471752 QTRT1Q9BXR0 403 aaKnown RBP5.99□□□□□ -1.45
USP48-207ENST00000471752 ZNF436Q9C0F3 470 aaPredicted RBP5.99□□□□□ -1.45
USP48-207ENST00000471752 COMMD5Q9GZQ3 224 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 PLEKHA2Q9HB19 425 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 COMMD3Q9UBI1 195 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 OR51B2Q9Y5P1 312 aa5.99□□□□□ -1.45
USP48-207ENST00000471752 A0A0A6YYH2 397 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 TRBV7-1A0A0A6YYK4 115 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 A0A0J9YWU9 116 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 A6NJ64 397 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 CREBL2O60519 120 aaPredicted RBP5.98□□□□□ -1.45
USP48-207ENST00000471752 HPGDSO60760 199 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 HIST1H1BP16401 226 aaKnown RBP5.98□□□□□ -1.45
USP48-207ENST00000471752 RPL35AP18077 110 aaKnown RBP5.98□□□□□ -1.45
USP48-207ENST00000471752 PRSS3P35030 304 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms