RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RNASE12Q5GAN4 147 aaKnown RBP11.57□□□□□ -0.56
COL1A1-203ENST00000471344 UNQ9165/PRO28630Q6UXU0 137 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 SNX29P2Q8IUI4 249 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 LAX1Q8IWV1 398 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 DEFB125Q8N687 156 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 OR2K2Q8NGT1 345 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 CD300LFQ8TDQ1 290 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 GPX8Q8TED1 209 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 CMTM3Q96MX0 182 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 CITED4Q96RK1 184 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 NEURL2Q9BR09 285 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 QTRT1Q9BXR0 403 aaKnown RBP11.57□□□□□ -0.56
COL1A1-203ENST00000471344 TUBA4BQ9H853 241 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 COMMD9Q9P000 198 aa11.57□□□□□ -0.56
COL1A1-203ENST00000471344 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 ZNF320A2RRD8 509 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 DBX1A6NMT0 343 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 LGALS9O00182 355 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 DHFRP00374 187 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 KRASP01116 189 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 F2RP25116 425 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 G6PCP35575 357 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 LPAR6P43657 344 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 MFAP2P55001 183 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 GUCA2BQ16661 112 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 PHLDA2Q53GA4 152 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 ZFAND6Q6FIF0 208 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 GPHB5Q86YW7 130 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 ZNF502Q8TBZ5 544 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 COMMD5Q9GZQ3 224 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 EDA2RQ9HAV5 297 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 MLXQ9UH92 298 aa11.56□□□□□ -0.56
COL1A1-203ENST00000471344 IGHV3-21A0A0B4J1V1 117 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 RBMY1BA6NDE4 496 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 RBMY1EA6NEQ0 496 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 CLEC3BP05452 202 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 RBMY1DP0C7P1 496 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 HIST1H1BP16401 226 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 CBLN1P23435 193 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 TM4SF20Q53R12 229 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 DGCR14Q96DF8 476 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 FAM110AQ9BQ89 295 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 BCL7BQ9BQE9 202 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 SLIRPQ9GZT3 109 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 CCDC59Q9P031 241 aaKnown RBP11.55□□□□□ -0.56
COL1A1-203ENST00000471344 DNAH1Q9P2D7 4330 aa11.55□□□□□ -0.56
COL1A1-203ENST00000471344 SMIM31A0A1B0GVY4 71 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 A8MWP6 167 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 FAM25AB3EWG3 89 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 FAM25CB3EWG5 89 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 FAM25GB3EWG6 89 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 GPR31O00270 319 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 TRAPPC2P0DI81 140 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 TRAPPC2BP0DI82 140 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 LYL1P12980 280 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 ERVK-16P61578 105 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 BTNL8Q6UX41 500 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 LINC00322Q6ZN03 302 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-203ENST00000471344 GDPD1Q8N9F7 314 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 OR6F1Q8NGZ6 308 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 SRSF8Q9BRL6 282 aaKnown RBP11.54□□□□□ -0.56
COL1A1-203ENST00000471344 SCPEP1Q9HB40 452 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 NDUFA4L2Q9NRX3 87 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 EXTL2Q9UBQ6 330 aa11.54□□□□□ -0.56
COL1A1-203ENST00000471344 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 M0QYG6 137 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 TPPPO94811 219 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 IGKV1-39P01597 117 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 IGKV1D-39P04432 117 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 SERPINE2P07093 398 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 MZT2AQ6P582 158 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 CADM3Q8N126 398 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 AP3S1Q92572 193 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 CXorf58Q96LI9 332 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 ABHD1Q96SE0 405 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 SRD5A3Q9H8P0 318 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 SLC2A8Q9NY64 477 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 OR51B2Q9Y5P1 312 aa11.53□□□□□ -0.56
COL1A1-203ENST00000471344 CCDC160A6NGH7 325 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 OR2T8A6NH00 312 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 OR11H12B2RN74 326 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 SCAF4O95104 1147 aaKnown RBP11.52□□□□□ -0.57
COL1A1-203ENST00000471344 TSPAN5P62079 268 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 FAM106AQ4KMX7 169 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 TBC1D26Q86UD7 250 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 OR1L8Q8NGR8 309 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 HIPK2Q9H2X6 1198 aa11.52□□□□□ -0.57
COL1A1-203ENST00000471344 TECRQ9NZ01 308 aaKnown RBP11.52□□□□□ -0.57
COL1A1-203ENST00000471344 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 F8W735 103 aaPredicted RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 RGS5O15539 181 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 TGOLN2O43493 480 aa11.51□□□□□ -0.57
COL1A1-203ENST00000471344 NOL3O60936 208 aaKnown RBP11.51□□□□□ -0.57
COL1A1-203ENST00000471344 PTBP1P26599 531 aaKnown RBP eCLIP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms