RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 IAPPP10997 89 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 GATA3P23771 443 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 MAS1LP35410 378 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 HTR2BP41595 481 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 REG1BP48304 166 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 ATP5IP56385 69 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 HBG1P69891 147 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 HBG2P69892 147 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 DIAPH2-AS1Q14236 149 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 HABP2Q14520 560 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 DEFB113Q30KQ7 82 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 SPANXN5Q5MJ07 72 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 RPL7L1Q6DKI1 246 aaKnown RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 PRSS57Q6UWY2 283 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM14EPQ6UXP3 125 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 VKORC1L1Q8N0U8 176 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 OR10P1Q8NGE3 313 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 OR5B3Q8NH48 314 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM167AQ8TBQ9 72 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 MALSU1Q96EH3 234 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 GINS3Q9BRX5 216 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 PARD6GQ9BYG4 376 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 SMIM3Q9BZL3 60 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 MS4A7Q9GZW8 240 aaPredicted RBP4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 ARV1Q9H2C2 271 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 MMP26Q9NRE1 261 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 TCF19Q9Y242 345 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 OR51B2Q9Y5P1 312 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 PKDREJQ9NTG1 2253 aa4.89□□□□□ -1.63
SMNDC1-204ENST00000471297 ITPR1Q14643 2758 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 TRAV3A0A0B4J244 114 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 A0A1W2PN81 502 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 A0A1W2PPI3 338 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 LINC00862A6NCI5 91 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 B4DSR2 109 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 INS-IGF2F8WCM5 200 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 RNASEK-C17orf49H0YIS7 233 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 CST7O76096 145 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 FSHBP01225 129 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 IGLV2-23P01705 113 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 OR8U8P0C7N1 319 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 CHRNA7P36544 502 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 VDAC2P45880 294 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 HOXA1P49639 335 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 DYNLT3P51808 116 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 DLX1P56177 255 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 OR2B8PP59922 312 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 RAB11AP62491 216 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 RPL8P62917 257 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 ERHP84090 104 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 PRCDQ00LT1 54 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 KLRD1Q13241 179 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 ALKAL2Q6UX46 152 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 CLEC9AQ6UXN8 241 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 PDZD9Q8IXQ8 264 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 MMD2Q8IY49 270 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 OR5C1Q8NGR4 320 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 OR1L8Q8NGR8 309 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 SCGB1C1Q8TD33 95 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 NRGNQ92686 78 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 PINX1Q96BK5 328 aaKnown RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 GNPNAT1Q96EK6 184 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 BSCL2Q96G97 398 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 TBX15Q96SF7 602 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 ATP5SQ99766 215 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 GGACTQ9BVM4 153 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 COMMD5Q9GZQ3 224 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 PLEKHA3Q9HB20 300 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 WFDC1Q9HC57 220 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 ABCA4P78363 2273 aa4.88□□□□□ -1.63
SMNDC1-204ENST00000471297 SPENQ96T58 3664 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 IGHV3-72A0A0B4J1Y9 119 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 TEX50A0A1B0GTY4 177 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 PMS2P5A8MQ11 134 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 H3BP45 60 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 TIMM23O14925 209 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 FGF16O43320 207 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 MOSP00540 346 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 IFNA10P01566 189 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 CRYGBP07316 175 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 MSMBP08118 114 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 METTL15P1P0C7V9 234 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 SPP1P10451 314 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 SULT1A2P50226 295 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 RAB5CP51148 216 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 SUB1P53999 127 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 F2RL1P55085 397 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 BLOC1S1P78537 153 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 LOXL1Q08397 574 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM267Q0VDI3 215 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 EBI3Q14213 229 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 CLINT1Q14677 625 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 PSG5Q15238 335 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 LRRC75BQ2VPJ9 315 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 LHFPL4Q7Z7J7 247 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM217Q8N7C4 229 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 NPBQ8NG41 125 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms