RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 AADACL3Q5VUY0 350 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 IL34Q6ZMJ4 242 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 OR4A4PQ8NGN8 299 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 RNF141Q8WVD5 230 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 DCUN1D4Q92564 292 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 ABHD14BQ96IU4 210 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 EHFQ9NZC4 300 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 OR1A1Q9P1Q5 309 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 RNF150Q9ULK6 438 aa10.53□□□□□ -0.72
HMGN1-211ENST00000471260 WI2-2373I1.2A0A1W2PRP0 233 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 FAM25EA8MYX2 175 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 G3V318 75 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 RAB9AP51151 201 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 DEFB136Q30KP8 78 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 DEFB121Q5J5C9 76 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 KCTD9Q7L273 389 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 BAP18Q8IXM2 172 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 SLC38A6Q8IZM9 456 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.52□□□□□ -0.73
HMGN1-211ENST00000471260 OR11H1Q8NG94 326 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 MARC2Q969Z3 335 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 RBMXL1Q96E39 390 aaKnown RBP10.52□□□□□ -0.73
HMGN1-211ENST00000471260 SAT2Q96F10 170 aaPredicted RBP10.52□□□□□ -0.73
HMGN1-211ENST00000471260 DUX3Q96PT4 197 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 GAB2Q9UQC2 676 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 WSB1Q9Y6I7 421 aa10.52□□□□□ -0.73
HMGN1-211ENST00000471260 H7C2Y5 167 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 PROP1O75360 226 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 OR8U8P0C7N1 319 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 INSL3P51460 131 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 SUPT4H1P63272 117 aaKnown RBP10.51□□□□□ -0.73
HMGN1-211ENST00000471260 CX3CL1P78423 397 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 IL15RAQ13261 267 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 KIAA0141Q14154 515 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-211ENST00000471260 SMCO1Q147U7 214 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 PLGLAQ15195 96 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
HMGN1-211ENST00000471260 LRRC37A5PQ49AS3 106 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 PDPNQ86YL7 162 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 TSNAXQ99598 290 aaKnown RBP10.51□□□□□ -0.73
HMGN1-211ENST00000471260 RTBDNQ9BSG5 229 aaPredicted RBP10.51□□□□□ -0.73
HMGN1-211ENST00000471260 PARP12Q9H0J9 701 aaKnown RBP10.51□□□□□ -0.73
HMGN1-211ENST00000471260 KLK15Q9H2R5 256 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 FBXL15Q9H469 300 aa10.51□□□□□ -0.73
HMGN1-211ENST00000471260 PIGBOS1A0A0B4J2F0 54 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 IGKV1-6A0A0C4DH72 117 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 CRYM-AS1A6NIL9 109 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 APOA2P02652 100 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 PGAM2P15259 253 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 AKIRIN2Q53H80 203 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 SGPP2Q8IWX5 399 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 OR10J5Q8NHC4 309 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 SEC22AQ96IW7 307 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 CABLES2Q9BTV7 478 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 ANXA10Q9UJ72 324 aa10.5□□□□□ -0.73
HMGN1-211ENST00000471260 FOXA2Q9Y261 457 aaPredicted RBP10.5□□□□□ -0.73
HMGN1-211ENST00000471260 SCO1O75880 301 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 IFNA21P01568 189 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 FCGR3AP08637 254 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 UCP3P55916 312 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 SRPXP78539 464 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 ZNF616Q08AN1 781 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 Q6ZS49 121 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 SPAG16Q8N0X2 631 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 SVBPQ8N300 66 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 ZNF383Q8NA42 475 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 OR1N2Q8NGR9 330 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 FLYWCH2Q96CP2 140 aaKnown RBP10.49□□□□□ -0.73
HMGN1-211ENST00000471260 RNF126Q9BV68 326 aa10.49□□□□□ -0.73
HMGN1-211ENST00000471260 CARHSP1Q9Y2V2 147 aaKnown RBP10.49□□□□□ -0.73
HMGN1-211ENST00000471260 C13orf42A0A1B0GVH6 325 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 A0A1W2PN81 502 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 SEC14L6B5MCN3 397 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 FCN1O00602 326 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 IGKV1-16P04430 117 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 EGR2P11161 476 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-211ENST00000471260 CHRNA7P36544 502 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 LGALS7P47929 136 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
HMGN1-211ENST00000471260 NDPQ00604 133 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 PSG5Q15238 335 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 ECSCRQ19T08 205 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 C10orf91Q5T1B1 145 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 CCDC71LQ8N9Z2 235 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 B9D2Q9BPU9 175 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 GNB4Q9HAV0 340 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 PLEKHA2Q9HB19 425 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 CYTL1Q9NRR1 136 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 METTL1Q9UBP6 276 aaKnown RBP10.48□□□□□ -0.73
HMGN1-211ENST00000471260 FBXO7Q9Y3I1 522 aa10.48□□□□□ -0.73
HMGN1-211ENST00000471260 M0R1X1 148 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms